Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1755 ATGGCTCGCTTACTGCTAGACACAGATTCAACTTCTTCATCAACCCCACCAGGCAATGGAGACAGAGCAAGAGGTTACACAAGTGATGCAAATTTTGACACAAACATGGTGATTATACTAGCAGCCTTGCTTTGTGCACTGATATGTGCTTTGGGGCTAAACTCAATAGTAAGGTGTGCTCTGAGATGCAGCAGAAGGTTTACTTTTGAGACACCAGAGGAAGCAGCAGCTAGGCTAGCAGCAAAAGGGCTAAAGAAGAGTGCATTGCGTCAGATTCCCATAGCAATGTATGGTTCATCAGGTTCTTCTAATATTGCAGCCACTGAGTGTCCTATTTGCCTAGGTGAGTTTGTTGATGGGGAGAAAGTGAGGGTGCTTCCCAAGTGTAACCATGGCTTCCATGTGAGGTGCATAGACACATGGCTCCTCTCTCACTCCTCTTGCCCTACTTGCAGACAGTCTTTGCTTGAAAAACCTAGTCCAAATCCAAACACTTCTGGGGATGTATAG 510 0.4588 MARLLLDTDSTSSSTPPGNGDRARGYTSDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFTFETPEEAAARLAAKGLKKSALRQIPIAMYGSSGSSNIAATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPTCRQSLLEKPSPNPNTSGDV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1755 169 SMART ring_2 110 151 IPR001841 -
Bisa05g1755 169 MobiDBLite consensus disorder prediction 1 21 - -
Bisa05g1755 169 MobiDBLite consensus disorder prediction 1 26 - -
Bisa05g1755 169 SUPERFAMILY RING/U-box 109 163 - -
Bisa05g1755 169 Pfam Ring finger domain 109 152 IPR001841 -
Bisa05g1755 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 157 IPR013083 -
Bisa05g1755 169 PANTHER RING-H2 FINGER PROTEIN ATL78 23 159 IPR044602 GO:0016567|GO:0016740
Bisa05g1755 169 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Bisa05g1755 169 SMART FANCL_C_2 106 159 - -
Bisa05g1755 169 CDD RING-H2_EL5-like 109 152 - -
Bisa05g1755 169 FunFam RING-H2 finger protein ATL72-like 75 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1755 Bisa-ChrBisa05 32843789 32844298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1755 1 161 C3H Transcription Factor Family AT3G10910 63.158 9.07e-66 197