LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa05g1749	ATGATTCTGAGGCTAATTCTGGAGATTGCTGAAATCGCTCCAATTCGTCAAGAACAGTCAGCTCTGGTCTTACTCAACAACCCTCCACCTCCTCCTCCTATCAATCTTCAATGATCTTCCTCTCTACAGTACCGCATTGCTTCAACTACACTGGTTCGAAAAGCTACTTTGTTAAATCTGCTTTGCAAGGCTTTAACAGAGAAGGGGAGAATTTCAAAAGGAGTTAAGCAAATGGATCCTGAATATGGGAAGTGTTGTGACACCTCAAAGAAGAATTCTTGGAAGACTATTTTGCTCCTAGCCTACCAAAGCCTTGGTGTAGTATATGGGGACTTGAGCATTTCTCCGTTATATGTTTACAAGAGCACATTTGCAGAAGACATTCAGCACTCACAGACCAATGAAGAGATTTTTGGTGTTCTTTCTTTTGTCTTCTGGACTCTGACATTGGTGCCACTGTTCAAATATGTGTTTGTGGTCCTCCGAGCTGATGATAATGGAGAGGGGGGTACGTTTGCCCTTTATTCCTTGATTTGTAGGCATGCCAAAGTTAGCCTTCTTCCTAACAGACAGCTCGCAGATGAAGCTCTCTCTACATATAAGATGGAGCAGCCTCCGGAGAGAAACAGCTCTAGAGTGAAAGCACTACTTGAGAAGTACAAGGCCTTGCATACGGCTCTACTAGTTTTGGTTCTTCTTGGCACTTGTATGGTAATTGGGGATGGACTGCTTACCCCAGCCATTTCGGTTTTCTCAGCCGTATCGGGTCTCGAGTTATCAATGTCCAAGGAACACCACCAGTATGCTGTGATTCCCATCACTTGCTTCATACTGGTGTGTTTGTTTGCACTTCAGCACTATGGTACACACAGAGTGGGATTTCTTTTTGCGCCAATTGTGCTGACATGGCTCCTATGCATCAGTACACTTGGCTTTTATAATATATTCAAATGGAATCCACATGTATATAAAGCTCTTTCTCCATATTATATGTTCAAGTTCTTGAAGAAGACAAGGATAAGTGGATGGATGTCCTTGGGCGGAATACTCTTATGCATAACAGGCTCGGAAGCTATGTTTGCTGATCTTGGGCATTTCTCATATGCGGCTATTCAGACTGCATTCACCTTTCTGGTATATCCTGCACTTATATTGGCATATATGGGTCAAGCAGCTTACTTGTCACAACATCATCATTCTAGTCATGAGATCAGTTTCTATATCTCAGTTCCAGATAAAGTGAGGTGGCCAGTCCTTGTCTTAGCCATTTTAGCTTCTGTTGTGGGAAGCCAAGCAATCATCAGTGGAACGTTTTCCATCATAAACCAGAGCCAGTCACTTGGTTGCTTCCCAAGAGTAAAGGTTGTTCATACATCAGATAAGATACATGGTCAGATCTACATCCCTGAAATCAATTGGATACTCATGATCCTCTGTATTGCTGTGACCATTGGATTTAGGGACACAAAACATATGGGAAATGCATCAGGGTTGGCAGTGATGACTGTGATGCTGGTGACTACATGCCTTACTTCCTTGGTGATTATAGTTTGTTGGCATAAACCCCCTATGATAGCTCTTTGCTTCCTACTGTTTTTCGGTTCTGTTGAGCTGCTGTATTTCTCAGCTTCCCTCACAAAGTTCCGGGAGGGTGCCTGGCTCCCTATCCTCCTTGCCCTCTTCCTTATGACCATAATGCTCATTTGGCACTATGCAACCATCAAGAAATATGAATATGACCTCCACAACAAGGTTTCCCTAGAATGGCTGTTGGCCTTAGGTCCAAGCTTGGGAATTGCTCGGGTGCCTGGAATAGGCCTAGTGTTCACTGATCTCACCTCTGGCATCCCTGCTAACTTCTCCCGCTTTGTCACCAACCTCCCTGCATTCCACCGCACCCTTGTCTTCGTATGCATAAAATCAGTACCAGTCCCTTATGTCCCAGTTGCCGAGAGGTACCTTGTTGGCCGTGTAGGGCCTGCCACTCACCGGTCCTACAGGTGTATAGTCAGATATGGATATCGCGATGTTCATCAGGATGTTGACTCCTTCGAATCAGAACTAGTAGAAAAGCTGGCTGGTTTTATCCGCTACGACTGGTACCGGGCACAAGGTTCTAACATAAGTATTGAGGATGATGCTTCAAACTCCAACGAATCAGCTAGTCACAGATTAACCGTGATAGGAACGGTTGGATTCTCAGGGCAGCCAGCTTATGAGATGGAGGAAACCTTGGAGCCAGCAAGTGTATCCGTTGGTTTCCCAACTGTGCAAAGCGTGACAGACGTCATCGAGATGGAACCGATGGGTGTGACCGAAAGAAGAGTGAGGTTTGCCATGGATGATGAAGAGGGTGGGAGTGAGACAAGGTGTGAGATGGATGTGCAAATGCAGGAAGAGCTGGGAGATCTTTATTGTGCTCAGCAAGCAGGAACAGCATTTATACTCGGGCATTCTCATGTGAGAGCAAAGAAAGGGTCATCGCTGATGAAGAGATTGGCGGTTAACTATGGCTATAATTTTCTGAGAAGGAACTGTAGAGGCCCAGATGTGGCGCTTAAGGTTCCCCCCGTTTCTCTTTTGGAGGTCGGGATGGTTTATGTTGTGTAG	2610	0.4521	MILRLILEIAEIAPIRQEQSALVLLNNPPPPPPINLQXSSSLQYRIASTTLVRKATLLNLLCKALTEKGRISKGVKQMDPEYGKCCDTSKKNSWKTILLLAYQSLGVVYGDLSISPLYVYKSTFAEDIQHSQTNEEIFGVLSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQLADEALSTYKMEQPPERNSSRVKALLEKYKALHTALLVLVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKEHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLTWLLCISTLGFYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYAAIQTAFTFLVYPALILAYMGQAAYLSQHHHSSHEISFYISVPDKVRWPVLVLAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIIVCWHKPPMIALCFLLFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMLIWHYATIKKYEYDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRTLVFVCIKSVPVPYVPVAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVEKLAGFIRYDWYRAQGSNISIEDDASNSNESASHRLTVIGTVGFSGQPAYEMEETLEPASVSVGFPTVQSVTDVIEMEPMGVTERRVRFAMDDEEGGSETRCEMDVQMQEELGDLYCAQQAGTAFILGHSHVRAKKGSSLMKRLAVNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYVV	869

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa05g1749	869	Pfam	K+ potassium transporter	102	676	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa05g1749	869	NCBIfam	potassium uptake protein	100	868	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa05g1749	869	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	90	867	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa05g1749	Bisa-ChrBisa05	32755281	32765378	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa05g1749	78	869	Inorganic Solute Cotransporters	AT2G40540	80.224	0.0	1313