Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1727 ATGTCCAGAGAAAGGGAAAAATTTGAGGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTATCTTCACAAATGGGAAGAAGACACATGTTGGGTCCTCCAGGAACCCTAAATACCATAACCCCATGTGCAGCATGTAAACTCCTGAGACGAAGATGTGCCCAAGAATGCCCCTTCTCTCCTTATTTCTCCCCTCATGAGCCCCAAAATTTTGCTTCCGTCCACAAAGTCTTCGGTGCTAGCAACGTCTCCAAGATGCTCATGGAGGTACCGGAGAGTCAAAGAGCAGATGCAGCAAAAAGTCTAGTGTATGAGGCAAATGTGAGGCTAAGAGACCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAGCAAGTTCAATCTTTACAAGCTGAACTTAACGCTGTAAGGGCTGAAATACTTAAATACAAACTTAGAGAAGCTACTACTAACATGAACATCATACCACCTTCCTCTCATCATCATCATCATCATCATCACATTCCAATCCTTCCTAATTCCTCTGGGGCTGTTTCTAATGCTGCTCCTCCGCCGCCACCACCACCACCGGCACCACCTCATCCTCCTACTAATTCATCATCATCTTCTTCCATGTACACCCAAGTCCAACACAGGCCTCCCACCAATTATACCACAATTTCAAGTGATCATAATATTTCCTATTTTGGATAA 699 0.4464 MSREREKFEEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQNFASVHKVFGASNVSKMLMEVPESQRADAAKSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKLREATTNMNIIPPSSHHHHHHHHIPILPNSSGAVSNAAPPPPPPPPAPPHPPTNSSSSSSMYTQVQHRPPTNYTTISSDHNISYFG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1727 232 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Bisa05g1727 232 MobiDBLite consensus disorder prediction 200 232 - -
Bisa05g1727 232 MobiDBLite consensus disorder prediction 155 232 - -
Bisa05g1727 232 MobiDBLite consensus disorder prediction 181 199 - -
Bisa05g1727 232 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Bisa05g1727 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 187 - -
Bisa05g1727 232 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1727 Bisa-ChrBisa05 32310548 32311771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1727 27 232 AS2 family AT2G40470 67.961 4.35e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g1727 LOB 7.6e-41 No_clan