Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1716 ATGTTCAATGGCTGCCCCGTGAAAGCTCAATGCTGGTATGCTTTTGTCACCATCAATGGGGATGAACACTCAGCTTCAGCCTTCAAGATTTTGGTACACTCTTCAGCAATATTGCTGTCACTGTTTCAGCATGGACTCTTTTGTCTTAATTGGACCCCTTCAATATTTTCTGTTTTTGGTTTTATTCTGTGCCCCATTTGGTCACATGATGTTATACAAATGGACACCAAAACGCGTACAGAATTCTCAGCCTCTGAAGGACACTGCTTCTCAGTGCTCAATCTCCAGCTCAAAGGGTTTAGGCCCGAGTTGATAGAGTGGTTAATTAAGGTTGATGGAGAAGTGGACTGTGGAAACAGACTCCTGAAGTGTAAAGACAAACTCTGCTTATCTGTCTATATATCAGCAGAGTTGATAGCAAAAGAAGAGCATCAAAAACAGGAAAAGAAAGCCAGAAGGATCAAAAAAGAAAAGAGAAAAAGAGAAGCCAGTATGGTGTTACTGTCTAGAGAGCACAAGAGAGCAGCACTGCATGAGAAGCTGCAGCTTCTTCGTTCTATTACTAACTCTCATGCTCTAAACGAAAAGTCGATCATAATCGATGCAACAAAGTATATCGAAGAGCTAAAGCAAAAAGTAGAAAGACTGAATCAAGAAATAGCCACCGCACAAACTTCAAATGGCCAAAATCCTTTGCCTATGGTTACAGTAGAAACCCTAGAAAAGGGATTCCTCATAAATGTTATTTCAGTGGAGAGTTGCCCAGGCCTGCTTGTTCCCATATTGGAGGCCTTCGAAGAGATGGGTCTCAGTGTGATGGAAGCTAGGGCTTCTTGTACAGACACTTTTCGTTTCCAAGCTGTTGGAGGAGAAGATGAAGAAGATGGTGAGAGTATAGATGCAGAAGCAGTGACACAAGCAGTGGGAAGAGCTATAAAAAATTGGAGAGAGAGTACTGAGCAACAGTAA 969 0.4211 MFNGCPVKAQCWYAFVTINGDEHSASAFKILVHSSAILLSLFQHGLFCLNWTPSIFSVFGFILCPIWSHDVIQMDTKTRTEFSASEGHCFSVLNLQLKGFRPELIEWLIKVDGEVDCGNRLLKCKDKLCLSVYISAELIAKEEHQKQEKKARRIKKEKRKREASMVLLSREHKRAALHEKLQLLRSITNSHALNEKSIIIDATKYIEELKQKVERLNQEIATAQTSNGQNPLPMVTVETLEKGFLINVISVESCPGLLVPILEAFEEMGLSVMEARASCTDTFRFQAVGGEDEEDGESIDAEAVTQAVGRAIKNWRESTEQQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1716 322 Coils Coil 199 226 - -
Bisa05g1716 322 Coils Coil 139 161 - -
Bisa05g1716 322 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 146 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1716 Bisa-ChrBisa05 32017664 32024707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1716 124 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 25.137 2.02e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1716 05 32017664 32024707 Bisa05g1716 05 32017664 32024707 CCT
Bisa05g1716 05 32017664 32024707 Bisa05g1716 05 32017664 32024707 ECH
Bisa10g0098 10 1515912 1518344 Bisa05g1716 05 32017664 32024707 ECH
Bisa09g0405 09 5860390 5862170 Bisa05g1716 05 32017664 32024707 ECH