Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1683 ATGGGTGGGAATTCCCCTTGCGCTTCATGCAAGCTGCTACGACGCCGTTGCACCAAGGACTGCATCTTCGCTCCTTACTTCCCCTCCGATGACCCCCAGAAGTTCGCCATCGTCCACAAGGTCTTCGGCGCCAGCAACGTCGGCAAAATGTTGCAGGAGCTTGCAGTTGATCAGAGAGCAGATGCAGTGAGCAGTTTGGTGTACGAGGCAAATGCGAGGGCTAGAGACCCAGTGTATGGGTGTGTTGGGGCCATATCGTATCTGCAAAACCAGGTTTCAGAGCTTCAAATGCAGCTCGCGGTGGCTCAGGCAGAGATACTCTGCATCCAGATGCAGCACGAGCAGGAGGCACTGGCAGTGATGCCCAACCCAGAAATGGAGCCACATCACAGTCCTTATTATCTCCAAAACCACACACCTCAGTACCTTAATTTTGCTTCTTCCAGCAATGTAATTCATGAGTCTCTCAAGAGAGAGAGCCTTTTCGGACACGACATGGTTTCTTCTTGA 510 0.5216 MGGNSPCASCKLLRRRCTKDCIFAPYFPSDDPQKFAIVHKVFGASNVGKMLQELAVDQRADAVSSLVYEANARARDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEQEALAVMPNPEMEPHHSPYYLQNHTPQYLNFASSSNVIHESLKRESLFGHDMVSS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1683 169 Coils Coil 85 105 - -
Bisa05g1683 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 132 - -
Bisa05g1683 169 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Bisa05g1683 169 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1683 Bisa-ChrBisa05 31257089 31257744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1683 3 130 AS2 family AT2G30130 80.469 3.08e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g1683 LOB 5.8e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1683 05 31257089 31257744 Bisa05g1683 05 31257089 31257744 ECH