Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1679 ATGATCTTGTTCTCGGAGCTTTCTCGCCGTCGGATTCGTAGTGTTAGCAACCTGATCAAGGTTGGTCGCATCGAGCCCGTCAGGGTCCTCAAGGTCGACAAGGAGAAGGGCTATGTCGATTTGAGCAAGAGGAGGGTCTCTGTAGAGGATATCCAGACCAGGAGAGATGTTATTGTTATGAAAATTGCTTTGGCCTTTGATAGGAATAGCAGACATGGGCAATTTTGCCAAACTAAATTCAAGTGGCTTTCTAAGGAGCTGTATATTCACATTGGATGGCCTTTATATCGCAAATATGGTCATGCTTTTGAGGCATTTAAAATAATTGTGACTGATCCTGATTCAGTTTTGAATTCCCTCACTAGTGAAGTCAAGGAGGTTGGCCCTGATGGGCAGGAGGTGACCAAGGTGGTTCCAGCTGTGTCAGCAGAAGTGAAGGAAGCTCTGGTAAAGAATATTAGAAGACGAATGACTCCCCAGCCCTTGAAAATTAGGGCAGATATTGAAATGAAATGTTTTCAGTTTGATGGGGTTCTTCACATTAAGGATGCAATGCGGAAAGCTGAAGCTGCCGGAAACAATGATTGCCCTGTAAAGATTAAACTCGAGCAAGGAATATTGGTTCTCAACATTGCTATTGTGGCTTGCACGGAAGCAATAGAGAAACACAAGGGTAAACTTGTTGTGAAGGAAGAACCCAGAGAAGTGAGTGAACGTGATGATAAATTGCTTGCTGAACACATGGCTAAGCGAAGATACAGAAATGGGAGAAGGAGCGGGCTAGCTCTTATGGCTAAGGCAGCTATGACGTCTCACGTGTCGACGCTTTATTCCCTCACAGTGATACAGTTCAACGGCAGTGGTGGCTCCAAATGCGAGAAGGATCTACGAGCCGGCGTGGCCTTATGCACACGAGCATCTCTCCTCGGTCACATTGACACGCTTCATGAGTTAGGTCATTGCCTCAAAGATGACTATGGCGTCCGCCAAAACATCGCCGAGGGACGTCGGTTGCTCATCGAAGCCAACGCGCTTGAGCTTGCTTTTGTCATACGCTCCGTCATGCAGGCGTCTTCGCCTCCCTGCACCTCATCCTCTCTGTTGACTTGGTCAGCCCACCGTGCTGGAGGTCCACTCGGCGAACTGGTTTCTACGAGAGTGGTTCGTGTTCTGTCTAGGAGTGCTAGAGGAAGCGAATCGGATACGAAATATGTTCACTACTATGAAAATGATGTTATGTTCAATATATACAGATGGCAGTATGATTATTGTTTGGATCTAGATTCTAGATGCTGGTACTTATGA 1305 0.4651 MILFSELSRRRIRSVSNLIKVGRIEPVRVLKVDKEKGYVDLSKRRVSVEDIQTRRDVIVMKIALAFDRNSRHGQFCQTKFKWLSKELYIHIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTSEVKEVGPDGQEVTKVVPAVSAEVKEALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLEQGILVLNIAIVACTEAIEKHKGKLVVKEEPREVSERDDKLLAEHMAKRRYRNGRRSGLALMAKAAMTSHVSTLYSLTVIQFNGSGGSKCEKDLRAGVALCTRASLLGHIDTLHELGHCLKDDYGVRQNIAEGRRLLIEANALELAFVIRSVMQASSPPCTSSSLLTWSAHRAGGPLGELVSTRVVRVLSRSARGSESDTKYVHYYENDVMFNIYRWQYDYCLDLDSRCWYL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1679 434 Gene3D - 1 46 IPR012340 -
Bisa05g1679 434 FunFam Eukaryotic translation initiation factor 2 subunit alpha 75 156 - -
Bisa05g1679 434 Pfam S1 RNA binding domain 1 44 IPR003029 GO:0003676
Bisa05g1679 434 Gene3D Tetratricopeptide repeat domain 231 351 IPR011990 GO:0005515
Bisa05g1679 434 Pfam Eukaryotic translation initiation factor 2 alpha subunit 87 202 IPR011488 GO:0003723|GO:0003743
Bisa05g1679 434 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 260 IPR011488 GO:0003723|GO:0003743
Bisa05g1679 434 SUPERFAMILY eIF-2-alpha, C-terminal domain 160 256 IPR024055 -
Bisa05g1679 434 Gene3D Translation initiation factor 2; subunit 1; domain 2 74 155 IPR024054 -
Bisa05g1679 434 SUPERFAMILY eIF2alpha middle domain-like 75 160 IPR024054 -
Bisa05g1679 434 SUPERFAMILY Nucleic acid-binding proteins 2 48 IPR012340 -
Bisa05g1679 434 Gene3D EIF_2_alpha 161 205 IPR024055 -
Bisa05g1679 434 ProSiteProfiles S1 domain profile. 1 44 IPR003029 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1679 Bisa-ChrBisa05 31171501 31187679 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1679 1 255 Eukaryotic Initiation Factors Gene Family AT5G05470 62.816 8.13e-104 310