Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1677 ATGAAGCAGATAGAGAAGCTAGTAGAGGTGAGCGAGCCAAAGATTCGAATAAACTTTGCTCTAAACTGCAAATGCCAAGCCACGGTGCGTCTGAGATCTCTATGCTCCACTGCACCTGTGGCCTTCAAGATTCAAACAGTATCACCCCACAAGTTCCTTGTGAACCCACCTAGCCTCATCCTCTCTCTCTTCCATGCCGCCTTCCAAGTCATCCTCAAGCCCCAGTCCCACCTTCCTTCTTCCTACCCTAGCTTCCCGTCCAATCGCTTCCTCATCAAAACCGTCGAGTTCACCCCTAACTGGTTTGATGCTTCCATTGAAGATGCGGCTGTGCAGCATGGAGATGTGAAGAAACTGGAGTCACTGTTCAAGCGAGGAGCAAACATTCACTACCATGATCAGTATGGTTTGATAGCCCTTCATGCGGCAGCCGTGAAAGGGCACAAAGATGTGGTGTTGATGCTCTGCGAAGCAGGGCTGGACTTGGAATGCGAGGACAAGGAAGGTCACGCGCATCTGCATATGGCGGCGGAGGGTGGCGACGAAGAGACTGCAAAGGTATTAGCGAACATGGGTGTGAACGTCAATGCTGAGAACAGAAAGGGTGCGACTCCTTTGTACATGGCTAGAATTTGGGGGTACAATCACATAGCTGACTTTCTTCTGAGCAAAGGAGCGAATTCTTCTTGTTGTAAATTTACGGTAAATTTACCAGTGGGTTTCAGTGAATCAGCATTCCTTCATGTTGAGTTAGATCAGTTGTTTGAAAGCAGAGACATCAATCCTTACGGGCTAACTCTGATTATGGTTCAGGGGATCATACCCAAAAAACTAAATCCTAAACCCTCAACCATTATACTAATCACAGACGCCATTACACTTCAAAATGTTTATTTTGGTCTAGCACAACAGGAAAGCTTCACTGATTGGCCAATTTTGAAGGTCAAAACTGTTTGTCACACTTGA 966 0.4669 MKQIEKLVEVSEPKIRINFALNCKCQATVRLRSLCSTAPVAFKIQTVSPHKFLVNPPSLILSLFHAAFQVILKPQSHLPSSYPSFPSNRFLIKTVEFTPNWFDASIEDAAVQHGDVKKLESLFKRGANIHYHDQYGLIALHAAAVKGHKDVVLMLCEAGLDLECEDKEGHAHLHMAAEGGDEETAKVLANMGVNVNAENRKGATPLYMARIWGYNHIADFLLSKGANSSCCKFTVNLPVGFSESAFLHVELDQLFESRDINPYGLTLIMVQGIIPKKLNPKPSTIILITDAITLQNVYFGLAQQESFTDWPILKVKTVCHT 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1677 321 Gene3D - 139 235 IPR036770 -
Bisa05g1677 321 SUPERFAMILY PapD-like 10 102 IPR008962 -
Bisa05g1677 321 ProSiteProfiles Ankyrin repeat region circular profile. 201 227 - -
Bisa05g1677 321 ProSiteProfiles Ankyrin repeat profile. 201 227 IPR002110 GO:0005515
Bisa05g1677 321 ProSiteProfiles Ankyrin repeat profile. 135 167 IPR002110 GO:0005515
Bisa05g1677 321 Pfam MSP (Major sperm protein) domain 26 103 IPR000535 -
Bisa05g1677 321 SUPERFAMILY Ankyrin repeat 108 232 IPR036770 -
Bisa05g1677 321 Pfam Ankyrin repeats (3 copies) 110 198 IPR002110 GO:0005515
Bisa05g1677 321 Gene3D Immunoglobulins 4 133 IPR013783 -
Bisa05g1677 321 ProSiteProfiles Ankyrin repeat region circular profile. 168 200 - -
Bisa05g1677 321 SMART ANK_2a 102 131 IPR002110 GO:0005515
Bisa05g1677 321 SMART ANK_2a 135 164 IPR002110 GO:0005515
Bisa05g1677 321 SMART ANK_2a 168 197 IPR002110 GO:0005515
Bisa05g1677 321 SMART ANK_2a 201 230 IPR002110 GO:0005515
Bisa05g1677 321 ProSiteProfiles Ankyrin repeat region circular profile. 135 167 - -
Bisa05g1677 321 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 110 231 - -
Bisa05g1677 321 ProSiteProfiles Ankyrin repeat profile. 168 200 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1677 Bisa-ChrBisa05 31166283 31168403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1677 110 227 Ion Channels AT4G32500 33.557 7.16e-10 58.2