Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1665 ATGAAAGACATGAAGGGGTATGAGCCCCGTTCAAGTTCTTCATGTGCAGCCTGCAAGCTCCTGAAGCGAAGATGCACGCCCAGCTGTATATTCGCCCCTTACTTCCGTTCCGACGAGTGCAAGAAATTCGCCAAAGTCCACAAGGTGTTTGGAGCCAGCAATGTCAGCAAGATCCTCATTGAGGTCCCGGAGGAGCATAGGGAGGACACGGTGAACTCCCTGGCCTACGAAGCAGAGGCCAGGCTCAAGGACCCTGTTTACGGATGCATTGGAGCCATAGCTCTGTTGCAGAGGAAGATGGTCGAGCTCCAGCATGACTTGGCCATCGCTAAGGCTCGTCTTGCTCGTTACTCTGCTGCTGCTAATGCTTCTGCTATTGCTCCTACTACCATTGCTTTCCCTTCCTCCTCTGATAATATCTTCGATACTGATTCCCATGTGGGTTTGCCTCCCTTCCCTGACTCTTCCTCTTCCTCTTGCTGTGAGTTCGATGATGGGTTCTCTTCGTCTCAGGTTCAGTTTTCGATCCGACATGATACGGTGGATGATTTTTTTCAAATACCATATATATTTTGA 576 0.5 MKDMKGYEPRSSSSCAACKLLKRRCTPSCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEHREDTVNSLAYEAEARLKDPVYGCIGAIALLQRKMVELQHDLAIAKARLARYSAAANASAIAPTTIAFPSSSDNIFDTDSHVGLPPFPDSSSSSCCEFDDGFSSSQVQFSIRHDTVDDFFQIPYIF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1665 191 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Bisa05g1665 191 Coils Coil 93 120 - -
Bisa05g1665 191 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Bisa05g1665 191 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1665 Bisa-ChrBisa05 30925878 30926453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1665 4 152 AS2 family AT3G11090 62.805 5.16e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g1665 LOB 2.8e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1665 05 30925878 30926453 Bisa05g1665 05 30925878 30926453 ECH