Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1662 ATGGACGACCACTCCCCCTCTCCCCCTCCTTCTCCCTCCTCTTCCTCCGCCGCCACCGCCACCAATCCCCCTCCGGCCTCCACCCGCAAATGCAAAGGCAAAGGCGGCCCCGACAACTGCAAGTTCAGGTACCGAGGTGTAAGGCAGCGAAGCTGGGGCAAGTGGGTGGCGGAGATCCGTGAGCCCCGCAAGCGAACTCGCAAGTGGCTCGGCACCTTCGCCACCGCCGAGGACGCCGCCCGGGCCTACGACCGCGCCGCTCTCATCCTCTATGGCTCCCGCGCTCAGCTCAACCTCCAGCCTTCCGCCTCATCCTCCTCCTCCCACCCCTCCTCCTCGCGCCCCTCTCACTCCTCCTCCACCCACACCCTACGCCCCTTGCTCCCCCGTCCTGCCGCCTTCGCCTTTGCCTTCTCCTCCTCGTCCTCCGCAGCCGCCGCCGCCACATCGGGCTTCATCCCCTTCGGGGTTTATAATAACCCCCAGTTGGTGTGCCCTATAAACAACAACGTAGTACAACATCAACAGGTGGTGCAAGTGCAAGTGCACCAACAACAAAAAGAAGAACAACAGTATCGGTCACCTGAATCTGATGGGAGTGTGGCTGGTTGTAATAGTCATAAAACTAATGTTGATGGTGATGCATCCGACAGAGGAGCAGCCTCGTACCAGAACAATACTCAACAGCATCATCATCATGCTGGACTGTCACTGTCCAATCAAGAGCATCATCAGAATCAGAATAATTGCATGTACGATGATATAAGCTCCTTGCTGGTGGGATCCAGCTTGTGTTCTTCCCAAACTATAGTTGCGCCGGCGGCGGAGGCTCTGGATCCGACGGCGCCTGTTGCAGTTGGTGTGGGATCTCCGTCGGTGTGGCCGATGACAACTGAGGAAGAGTACCCATCGAGTCTATGGGACTATAATGATCCTTTCTTCTTTGATTTTTGA 954 0.5734 MDDHSPSPPPSPSSSSAATATNPPPASTRKCKGKGGPDNCKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSASSSSSHPSSSRPSHSSSTHTLRPLLPRPAAFAFAFSSSSSAAAAATSGFIPFGVYNNPQLVCPINNNVVQHQQVVQVQVHQQQKEEQQYRSPESDGSVAGCNSHKTNVDGDASDRGAASYQNNTQQHHHHAGLSLSNQEHHQNQNNCMYDDISSLLVGSSLCSSQTIVAPAAEALDPTAPVAVGVGSPSVWPMTTEEEYPSSLWDYNDPFFFDF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1662 317 MobiDBLite consensus disorder prediction 1 42 - -
Bisa05g1662 317 Pfam AP2 domain 43 92 IPR001471 GO:0003700|GO:0006355
Bisa05g1662 317 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Bisa05g1662 317 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Bisa05g1662 317 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
Bisa05g1662 317 MobiDBLite consensus disorder prediction 100 125 - -
Bisa05g1662 317 MobiDBLite consensus disorder prediction 195 210 - -
Bisa05g1662 317 SUPERFAMILY DNA-binding domain 43 101 IPR016177 GO:0003677
Bisa05g1662 317 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 25 250 - -
Bisa05g1662 317 MobiDBLite consensus disorder prediction 219 237 - -
Bisa05g1662 317 FunFam Ethylene-responsive transcription factor 2 43 101 - -
Bisa05g1662 317 CDD AP2 43 100 IPR001471 GO:0003700|GO:0006355
Bisa05g1662 317 MobiDBLite consensus disorder prediction 184 237 - -
Bisa05g1662 317 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Bisa05g1662 317 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1662 Bisa-ChrBisa05 30864485 30865438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1662 29 317 AP2-EREBP Transcription Factor Family AT2G40220 47.267 5.26e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g1662 AP2 6.5e-13 CL0081