Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1661 ATGTCAAGCCAGCAGGACGCTCAGGTATTCAATTGGCACTATACAGAGCTGGATGATCGGAATCTCGAAGTTCGCGGCCGAAAAGTCTTCTTGATCGTCGTCCTTTTCTGTATTATCCTTCTAGTTACACTTCTCTTCCTCTGCGCTCGCTGGATCCGCCGGTACCGTGGCCGCCTTCCCACTACCTTCCAGTACTCAAGCCAAGTGCGTCACGCGCCGCCTCCGGCTTCGAAGGGTCTCGACCTTGCTTCGATCAAAAGATTGCCGATAATCCTGCACCAGGCGCCCTCGGATTCCGATTGCGCATTGGAGGAAACAGAGTGCTGTATTTGCCTTAGTGTATTCGAAGATGGTGAGAAATTGAAGGTCCTGCCTGGCTGTGATCATTGTTTCCACTGTGAGTGCGTCGATAACTGGCTTATTAATCACTCCAGTTGTCCACTCTGCAGATCTTGTCTCAAAGTTGATTCTACCTTTCCACAAATTTTGATTCAAGAACCCCCTATTAGAATCGACGTTCAATTATAG 528 0.4905 MSSQQDAQVFNWHYTELDDRNLEVRGRKVFLIVVLFCIILLVTLLFLCARWIRRYRGRLPTTFQYSSQVRHAPPPASKGLDLASIKRLPIILHQAPSDSDCALEETECCICLSVFEDGEKLKVLPGCDHCFHCECVDNWLINHSSCPLCRSCLKVDSTFPQILIQEPPIRIDVQL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1661 175 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Bisa05g1661 175 Pfam Ring finger domain 107 150 IPR001841 -
Bisa05g1661 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 155 IPR013083 -
Bisa05g1661 175 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 29 157 - -
Bisa05g1661 175 SMART ring_2 108 149 IPR001841 -
Bisa05g1661 175 SUPERFAMILY RING/U-box 101 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1661 Bisa-ChrBisa05 30835026 30835553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1661 3 158 C3H Transcription Factor Family AT3G11110 41.358 8.48e-33 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1661 05 30835026 30835553 Bisa05g1661 05 30835026 30835553 CCT