Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1659 ATGGGTGTCCCCTCCAGCAACAACAACGTCTCCGATCGGATCAAAGGGTCGTGGAGCCCTCAAGAGGACGCCACTCTCGTCAAGCTCGTCGAGCAGCACGGCCCTCGCAATTGGTCCCTCATCAGCATAGGCATTCCCGGCCGCTCCGGCAAGTCCTGCAGGCTCCGGTGGTGCAATCAGCTCAGCCCCGCCGTCCAGCACCGTCCCTTCAATCCCGCCGAGGACGACATCATCGTCCAGGCCCACGCCGTCCACGGCAACAAGTGGGCCACCATCGCGCGGCTCCTCCCCGGCCGTACGGATAACTCCATCAAGAACCACTGGAACTCCACCCTCCGCCGCCGTCGCGCGGGGGAGATAACGTCGGCGTCAGGGTCTTCGGAGTCGGACTCGGTATTGGTAAAGAGGACAGCGCCGTGCGACCTGCCGGAGTTGGGGCAACAACTGAAGCGGCAGTGTCTCCGGTGGGTGTCACCGGAGAACGAGGATCCGAGGGAGGAGGGGAAGAGATTGGTGGGTCCTGTGACGACGTCGTTGAGTTTGTTGCCGCCGGGAATCAAGGAGGAAGAAGAGAATGAGGGTGAAGAAGAAGGCGAAGAGAAGGGGAAGGGGAAAGGAGAGGAAGAGGAATCGTGCCTACTGACGGTGATGCAGCAGATGATAGCAACGGAGGTTAGGAATTACATTGAGAATCTGCGTGCTGAGAATAGGCTCGTCTTCAGAACAGAATTGGGCCTTCACTTTGAGCCATCCATTCCTAAAACCACAGATCATATCTCTAATGTGGGAATTGAGAATTGTAAACTATGTTCTGGATTTATGGCATTGATCTTGGAAAATATAGTCATGAATCAGAAGTATTTGCAGATAGATTTAGCAAATCCACTTGCAGGTCATCATGATTCGGCGGTTCCTGTCTCAGCTGCTGTCTCAAAAACTACATAA 945 0.5513 MGVPSSNNNVSDRIKGSWSPQEDATLVKLVEQHGPRNWSLISIGIPGRSGKSCRLRWCNQLSPAVQHRPFNPAEDDIIVQAHAVHGNKWATIARLLPGRTDNSIKNHWNSTLRRRRAGEITSASGSSESDSVLVKRTAPCDLPELGQQLKRQCLRWVSPENEDPREEGKRLVGPVTTSLSLLPPGIKEEEENEGEEEGEEKGKGKGEEEESCLLTVMQQMIATEVRNYIENLRAENRLVFRTELGLHFEPSIPKTTDHISNVGIENCKLCSGFMALILENIVMNQKYLQIDLANPLAGHHDSAVPVSAAVSKTT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1659 314 CDD SANT 69 112 IPR001005 -
Bisa05g1659 314 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bisa05g1659 314 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Bisa05g1659 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa05g1659 314 Gene3D - 14 66 - -
Bisa05g1659 314 Gene3D - 69 115 - -
Bisa05g1659 314 PANTHER MYB PROTEIN-RELATED 15 158 - -
Bisa05g1659 314 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa05g1659 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Bisa05g1659 314 FunFam MYB transcription factor 15 66 - -
Bisa05g1659 314 CDD SANT 17 59 IPR001005 -
Bisa05g1659 314 MobiDBLite consensus disorder prediction 159 209 - -
Bisa05g1659 314 SMART sant 14 63 IPR001005 -
Bisa05g1659 314 SMART sant 66 114 IPR001005 -
Bisa05g1659 314 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Bisa05g1659 314 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1659 Bisa-ChrBisa05 30828649 30830743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1659 10 120 MYB Transcription Factor Family AT3G50060 68.468 9.94e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g1659 Myb_DNA-binding 1.4e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1659 05 30828649 30830743 Bisa05g1659 05 30828649 30830743 CCT
Bisa05g1659 05 30828649 30830743 Bisa05g1659 05 30828649 30830743 ECH