Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1658 ATGGAAAATTTCTACTATTCTAATTCGAGTTCTAGCTGTTGGGCTTTTCAAGGCACAAGCACTTGTGACCCTCCTCCCTTTTCTGTCCAAACTCCATTGTTGCCTCATCATCTCTCTGACTCTTCCTCTGTTCAGTTCTGTGAGTTCCCTCATTCATGGCCTTTATCTGCAGAAGATAAAGCTGTCAGTGCCTCCAAGAGCCATAGCCAAGCAGAGAAACGCCGCAGGGACAGGATCAATGCCCAGCTTGCCACTCTCAGAAAACTCATTCCCAAGTCTGATAAGATGGACAAGGCAGCATTGCTAGGGAGTGTGATAGAGGAAGTGAAAGATCTGAAACGAAAAGCCATGGACATAGGCACATCCTTCATAGTTCCCACAGAGATAGACGAGGTCTCAATAGACCAAGACCCTGCTCAAGACGAAGCCTCCATTAACAGCAACACCAAGGTGAACTACAAACTGAAGGGAAACAAGAAGATAGTGATTAAAGCCTCTGTGTGCTGCGACGACAGACCGGAGCTGTTCTCAGAGCTGATCCAAGTGCTCAAAGCCCTAAGGCTCACAGCAGTGAAAGCAGACATAGCCAGCGTGGGAGGAAGAATCAAAAGCATATTGGTGCTGTGTTGTAAGGACAGTGAAGACAGTGTGTGCCTCAATACTCTCAAACAATCGCTTAAATCTGCTGTCACAAAAATTGCTGCTTCGTCTTCCATTGCTTCCACGTGTCCTGCTAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCTCATTATCTACACTGA 783 0.4662 MENFYYSNSSSSCWAFQGTSTCDPPPFSVQTPLLPHHLSDSSSVQFCEFPHSWPLSAEDKAVSASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIEEVKDLKRKAMDIGTSFIVPTEIDEVSIDQDPAQDEASINSNTKVNYKLKGNKKIVIKASVCCDDRPELFSELIQVLKALRLTAVKADIASVGGRIKSILVLCCKDSEDSVCLNTLKQSLKSAVTKIAASSSIASTCPARSKRQRFFLPSHYLH 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1658 260 CDD ACT_UUR-ACR-like 166 201 - -
Bisa05g1658 260 CDD bHLH_AtAIG1_like 58 137 - -
Bisa05g1658 260 Gene3D - 57 119 IPR036638 GO:0046983
Bisa05g1658 260 SMART finulus 69 118 IPR011598 GO:0046983
Bisa05g1658 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 112 IPR011598 GO:0046983
Bisa05g1658 260 PANTHER TRANSCRIPTION FACTOR BHLH30 52 257 IPR045847 GO:0003700|GO:0006355
Bisa05g1658 260 Pfam Helix-loop-helix DNA-binding domain 66 112 IPR011598 GO:0046983
Bisa05g1658 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 115 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1658 Bisa-ChrBisa05 30788757 30790390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1658 37 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 45.852 5.37e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa05g1658 HLH 2.3e-10 No_clan