Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1640 ATGCCGTTCGTCGAACCTCTGCGTGCCATGGCAAGGTTTAGAGATGGTGGTTCGAAGTCGAAGCAGTGTGTGCGTTCGGCTGCGACTAAGGGTGCACCTACTGTTGGTGCGGGGTTGATCAGTAGTTGCCGCTACAACGAAGCTAGGCAGTGGTTGCCTAGTAGCCACCATAATAGCAATGCATCTTGGAATAACAACGTCTCTGGGGAGATCGACGTCAGTGTCCGAAGCTCAGAAATGGCCATTAAGGTCAACACAACGCTGGTTTGGGCGTGCCTTCTCTGGGTTTTCGTTCTGTGCGCAATTATAGCATTCTTTCAGCTTATATTGATAGAGAACGAAGGCGACTCTTCGTCTCCCGGCAAGGTCATCAGAACTGAGCACTATCCGGTGACAACCGATAGTAGATCTGAATACTCATCGGAAGAGGATTTGAAGGGAATCACCCACAAGGTGTTTTTTGATATAGAGATCGACGGAAAACATGCCGGTCGCATTGTCATCGGACTTTTTGGGGCAGTGGTTCCAAAAACCGTAGAAAACTTTCGAGCACTTTGTACTGGTGAGAAAGGGTTGGGAAGAAGCGGGAAGCCTCTTCATTACAAAGGTAGCATATTCCATAGGATAATACCCAGCTTTATGGTCCAAGGGGGTGATTTCACCCGTGGTGATGGACGAGGCGGAGAGTCAATCTATGGTGATAGGTTTGCTGATGAAAACTTCAAATTGAAGCATACTGGACCAGGATACTTGTCCATGGCAAATGCTGGATCAGACACCAATGGCTCACAGTTTTTTATAACAACAGTAAAAACCAGCTGGTTGGATGGACGCCATGTTGTATTTGGCAAGGTGCTTTCTGGAATGGACGTAGTCTACAAGATTGAAGCAGAAGGAAGTGCAAATGGCGAGCCCAAAAGCAGGGTTGTTATTTTAGACAGTGGAGAATTAACTTCATGA 960 0.4719 MPFVEPLRAMARFRDGGSKSKQCVRSAATKGAPTVGAGLISSCRYNEARQWLPSSHHNSNASWNNNVSGEIDVSVRSSEMAIKVNTTLVWACLLWVFVLCAIIAFFQLILIENEGDSSSPGKVIRTEHYPVTTDSRSEYSSEEDLKGITHKVFFDIEIDGKHAGRIVIGLFGAVVPKTVENFRALCTGEKGLGRSGKPLHYKGSIFHRIIPSFMVQGGDFTRGDGRGGESIYGDRFADENFKLKHTGPGYLSMANAGSDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVVYKIEAEGSANGEPKSRVVILDSGELTS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1640 319 CDD cyclophilin_ABH_like 150 315 - -
Bisa05g1640 319 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 201 218 IPR020892 GO:0003755|GO:0006457
Bisa05g1640 319 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 153 316 IPR002130 GO:0000413|GO:0003755
Bisa05g1640 319 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 154 313 IPR002130 GO:0000413|GO:0003755
Bisa05g1640 319 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 206 218 IPR002130 GO:0000413|GO:0003755
Bisa05g1640 319 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 277 292 IPR002130 GO:0000413|GO:0003755
Bisa05g1640 319 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 264 276 IPR002130 GO:0000413|GO:0003755
Bisa05g1640 319 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 249 264 IPR002130 GO:0000413|GO:0003755
Bisa05g1640 319 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 185 IPR002130 GO:0000413|GO:0003755
Bisa05g1640 319 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 151 317 - -
Bisa05g1640 319 Gene3D - 138 319 IPR029000 -
Bisa05g1640 319 FunFam Peptidyl-prolyl cis-trans isomerase 145 318 - -
Bisa05g1640 319 SUPERFAMILY Cyclophilin-like 148 317 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1640 Bisa-ChrBisa05 30412974 30417757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1640 164 296 U-box Gene Family AT5G67530 45.522 9.49e-26 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1640 05 30412974 30417757 Bisa05g1640 05 30412974 30417757 ECH