Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1612 ATGGAGGCGAAGGAGCAGGATGTTTCGTTGGGAGCCAACAAGTTCCCGGAGAGGCAGCCTATTGGGACGGCGGCTCAGAGCCAGGACGAAAAGGACTACCAGGAGCCACCGCCGGCGCCGCTGTTTGAGCCCTCGGAGCTGACATCGTGGTCCTTTTACAGAGCCGGGATAGCCGAGTTCGTCGCCACTTTCCTCTTCCTCTACATCACCATCTTGACCGTCATGGGCGTCAACAGAACTGGGAACACATGCAAAACCGTCGGGATTCAAGGAATCGCTTGGGCTTTTGGGGGCATGATCTTCGCCCTCGTCTACTGTACAGCTGGCATCTCAGGTGGTCACATAAATCCGGCGGTGACATTCGGGTTGTTTTTGGCGAGGAAGTTGTCGTTGACGAGGGCACTGTTCTACATGGTGATGCAGTGCCTGGGTGCGATCTGTGGTGCGGGTGTGGTGAAGGGCTTCGAGGGCAAGAGACTGTACGGGCAACTTGGCGGCGGCGCCAACTATGTGCACCCCGGCTACACCAAAGGGGACGGCCTCGGCGCTGAGATTGTTGGCACCTTCGTCCTTGTCTACACCGTCTTCTCAGCCACCGACGCCAAGCGTAGCGCTCGAGATTCCCACGTCCCTATTTTGGCTCCCTTGCCAATTGGGTTCGCTGTGTTCTTGGTCCACTTGGCCACCATCCCCATCACCGGAACCGGTATCAACCCAGCTCGGAGTCTCGGAGCTGCCATCATCTTCAACAAAGACCTTGGCTGGGATGAGCACTGGATTTTCTGGGTGGGACCATTCATCGGAGCAGCGCTGGCAGCTGTGTACCACCAAGTCGTGATCAGGGCCATGCCGTTCAAGTCGAAGTGA 867 0.5767 MEAKEQDVSLGANKFPERQPIGTAAQSQDEKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRTGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFEGKRLYGQLGGGANYVHPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDEHWIFWVGPFIGAALAAVYHQVVIRAMPFKSK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1612 288 SUPERFAMILY Aquaporin-like 46 281 IPR023271 -
Bisa05g1612 288 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Bisa05g1612 288 MobiDBLite consensus disorder prediction 1 38 - -
Bisa05g1612 288 NCBIfam MIP family channel protein 58 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 PRINTS Major intrinsic protein family signature 259 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 Gene3D Glycerol uptake facilitator protein. 39 287 IPR023271 -
Bisa05g1612 288 FunFam Probable aquaporin PIP1-2 39 288 - -
Bisa05g1612 288 CDD MIP 54 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1612 288 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 283 IPR034294 -
Bisa05g1612 288 Pfam Major intrinsic protein 46 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1612 Bisa-ChrBisa05 29665641 29667490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1612 1 288 Major Intrinsic Protein MIP AT4G23400 86.111 4.81e-173 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1612 05 29665641 29667490 Bisa05g1612 05 29665641 29667490 CCT
Bisa05g1612 05 29665641 29667490 Bisa05g1612 05 29665641 29667490 ECH