Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1610 ATGTCTAAAACCCTAGCGTCTCGGTCACACCAGGAGGCTCGTTGTCCTTGCGCTCCCATCCTCGCACGCCTTGTTTGGTGGAGTGAACTAGGAATCGCAGCTCCGAGCATGGCGGCGAGCGAGCGCACGGTGTTGCAGTTCTCTGCCTCTTCGCTGGGCTTATCTGCAAAGGTTCACCCTCTGGTTATCTTCAACATCTGCGACTGCTTTGTACGACGTCCTGACCAAGCGGAGCGCGTCATCGGAACACTACTTGGCTCCGTCTTGCCCGATGGAACCGTCGATATCCGTAATTCCTATGCTGTTCCCCACAATGAATCATTGGGCCAGGTTGCTTTGGATATTGAGTACCATCACAATATGTTAATATCCCACCAAAAAGTGAACCCGAAGGAAGTCATAGTTGGGTGGTATTCAACTGGCCTTGGAGTGGCTGGTGGTAGTGCATTAATCCATGAATTTTATTCTCGTGAAGTGCCCAATCCTGTACATTTGACTGTTGATACAGGATTCACAAATGGAGAGGGAACTATAAAAGCATATGTATCGAACAATTTATCTCTTGGAGACCGGCAAATTGCTGCTCAGTTTCAAGAGATCCCTCTGGATCTTCGCATGGTTGAAGCTGAGCGTATTGGATTTGATACCCTGAAGGCAACCACCGTTGACAAAATCCCAAATGATTTGGAAGGGATGGAAGCAACAATGGAGCGTCTACTAGCCCTGATTGATGACACATACAAATACGTTGATGATGTAGTGGAAGAGCGTGTTGTGCCAGACAATAACGTTGGCAGATTTATATCAGATGCTGTAGGTTCCCTTCCCAAATTGCCTCCTTCAGCTTTTGACAAGCTTGTGAATGACAGCTTGCAGGATCATTTGCTCTTGCTATATTTATCAAGTATCACCAGGACCCAACTTAGCTTGGCCGAAAAATTGAACACTGCTGCTCAGATTCTGTGA 966 0.472 MSKTLASRSHQEARCPCAPILARLVWWSELGIAAPSMAASERTVLQFSASSLGLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLGQVALDIEYHHNMLISHQKVNPKEVIVGWYSTGLGVAGGSALIHEFYSREVPNPVHLTVDTGFTNGEGTIKAYVSNNLSLGDRQIAAQFQEIPLDLRMVEAERIGFDTLKATTVDKIPNDLEGMEATMERLLALIDDTYKYVDDVVEERVVPDNNVGRFISDAVGSLPKLPPSAFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1610 321 Gene3D Cytidine Deaminase, domain 2 44 222 - -
Bisa05g1610 321 FunFam Eukaryotic translation initiation factor 3 subunit F 44 222 - -
Bisa05g1610 321 SMART pad1_6 55 186 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bisa05g1610 321 Pfam Maintenance of mitochondrial structure and function 208 314 IPR024969 -
Bisa05g1610 321 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 55 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bisa05g1610 321 CDD MPN_eIF3f 57 314 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bisa05g1610 321 ProSiteProfiles MPN domain profile. 56 187 IPR037518 -
Bisa05g1610 321 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 48 318 - -
Bisa05g1610 321 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 54 317 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1610 Bisa-ChrBisa05 29658339 29662830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1610 38 321 Eukaryotic Initiation Factors Gene Family AT2G39990 78.351 4.77e-162 452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1610 05 29658339 29662830 Bisa05g1610 05 29658339 29662830 ECH