Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1609 ATGGAAGAGAGCACGTCAGGGTTTTGTATGAGATCAGGTAATAATAATGGGAATAGCAGTGGGACTAAGTGTGGACGATGGAATCCCACAACAGAACAAGTGAAGCTTCTCACTGAACTGTTCAGGTCTGGACTCAGAACCCCAAGTACTGATCAGATTCAGAGGATCTCCACTCAGCTTAGCTTCTATGGCAAGATTGAGAGCAAGAATGTTTTCTACTGGTTTCAGAACCATAAAGCCAGAGAAAGACAGAAGCGTCGCAAAGTCAATAATAATCGTCGCCAAAGCTCTCTGTATTCTTCTACCAACAATTTTGGAGAGGCGAATCAGGTTTCGGAGTCAGAGAGAGTGACGGAGACTCTTGAGCTCTTCCCATTGAACTCCTTTGGTGAATCTGAATCAGAGAGACTGAGAGTGCACCAAAATGAATGCATTTCATACACAGTGGAAAAAGAGGTGGATCACCTTCCACTGGATTTGCGGTTGAGCTTTCTGTAA 498 0.4418 MEESTSGFCMRSGNNNGNSSGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQRISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVNNNRRQSSLYSSTNNFGEANQVSESERVTETLELFPLNSFGESESERLRVHQNECISYTVEKEVDHLPLDLRLSFL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1609 165 FunFam WUSCHEL-related homeobox 11 23 91 - -
Bisa05g1609 165 Pfam Homeodomain 24 84 IPR001356 GO:0003677
Bisa05g1609 165 MobiDBLite consensus disorder prediction 1 27 - -
Bisa05g1609 165 SUPERFAMILY Homeodomain-like 9 86 IPR009057 -
Bisa05g1609 165 MobiDBLite consensus disorder prediction 93 112 - -
Bisa05g1609 165 Gene3D - 16 85 - -
Bisa05g1609 165 MobiDBLite consensus disorder prediction 83 112 - -
Bisa05g1609 165 ProSiteProfiles 'Homeobox' domain profile. 20 85 IPR001356 GO:0003677
Bisa05g1609 165 SMART HOX_1 22 89 IPR001356 GO:0003677
Bisa05g1609 165 CDD homeodomain 26 86 IPR001356 GO:0003677
Bisa05g1609 165 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 97 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1609 Bisa-ChrBisa05 29609068 29609655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1609 1 165 Wox Gene Family AT3G11260 55.435 2.59e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa05g1609 Homeodomain 5e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1609 05 29609068 29609655 Bisa05g1609 05 29609068 29609655 CCT
Bisa05g1609 05 29609068 29609655 Bisa05g1609 05 29609068 29609655 ECH