Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1592 ATGGCCATGACAAAGAAGTCTCATGTTGTTGATATAGATAATGGTTGTCGACGAAACATCTTCGGCGAGGGTAGAGATGAAGGGTATTCTTCAGACGCCGGCGACAGGTCAGATAACAAGCAGAGGTCTGTCGGTGAAATTATGGGAGAGTCAAAAAAGGGGAGGGGATCCTATGCATTGAAGGGTTCAGTGGAGATGGAGATAGAGGTTAATCTGCCTGAAGTGAAGGTGCATTTGGGAAAGGTAGAGAAGGATTGCAGGATTTGTCATCTGAGTATGGATATGAGCAATCACCATGAATGTGGGACTCACATTGAGTTGGGATGTTCTTGCAAGGATGATTTGGCTACTGCTCACAAGAAATGTGATGAGGCTTGGTTCAAGATCAAGGGTAATAAGTAA 402 0.4453 MAMTKKSHVVDIDNGCRRNIFGEGRDEGYSSDAGDRSDNKQRSVGEIMGESKKGRGSYALKGSVEMEIEVNLPEVKVHLGKVEKDCRICHLSMDMSNHHECGTHIELGCSCKDDLATAHKKCDEAWFKIKGNK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1592 133 MobiDBLite consensus disorder prediction 23 49 - -
Bisa05g1592 133 PANTHER ZINC FINGER, RING-CH-TYPE 31 133 - -
Bisa05g1592 133 SMART ringv_2 85 133 IPR011016 GO:0008270
Bisa05g1592 133 ProSiteProfiles Zinc finger RING-CH-type profile. 78 133 IPR011016 GO:0008270
Bisa05g1592 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 133 IPR013083 -
Bisa05g1592 133 MobiDBLite consensus disorder prediction 23 56 - -
Bisa05g1592 133 Pfam RING-variant domain 86 130 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1592 Bisa-ChrBisa05 29176689 29177090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1592 30 133 C3H Transcription Factor Family AT5G05830 51.852 2.59e-27 99.0