Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1552 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAAGGAGATACGCCGGCTCCGGTTGAGCCGAGCCGAGCCTCTCGCCGTCGGAGGTTGGACATACTGCCATCGAAGTACATAGCTGACATGGCAGTGCCCCTGCCAGAGAACGGCCTGAAGCGCCAAAAGCTCGATCTCTGTGCTGCTTCTCCGACGCAACCTAGAGACTGCGTAAACGCAGTTGAGAACATTGAATCTAGCGGTGTTAAGGACGAAGAGGAACAAAATAAACAACCTAAAGGAGATAAAGATGAAGCTAAGTCGACAGTTCTGTTGTTAAATTCAACTGCTACAGAGGGGACTAGTAATGAGGCTATTAATGAGTTTCCGAAGTTTGGGGTAACTTCTGTTTGTGGTAGAAGGAGGGATATGGAAGACGCTGTCTCGGTTCGTCCGTCGTTGTGCGAAGAGGATGGTGAAAAACGAAAGGAGTTTCACTACTTCGGTGTGTTCGACGGCCATGGTTGCTCTCATGTAGCGACGATCTGTAAGGATAGGTTACATGAGATTGTGAAGGAAGAAATTGGAGGAGCTCGAGAGGATTTGGAATGGAAGTCTACGATGGAGAACAGTTTTGCACGGATGGACGAAGAGGTGCAGAACTGGAGCCAGAGCAACCAGAACTCCACTTGTAGATGCGAACTTCAGACCCCTCACTGCGATGCCGTGGGATCTACCGCTGTCGTTGCCGTCGTTACGCCGGACAAGATCATTGTCTCCAACTGCGGCGATTCGCGCGCCGTTCTCTGCCGAAACGGCGTCGCCGTCCCTCTCTCCTCCGATCACAAGCCCGACCGACCCGACGAGTTGCTCCGAGTCCAAGCCGCCGGAGGGCGCGTGATTTACTGGGACGGCCCGAGAGTGCTCGGAGTTCTGGCAATGTCCAGGGCAATCGGCGATAATTATCTGAAGCCGTATGTGATATCGGAGCCGGAGGTGACGGTGACGGAACGGACGGACGAAGACGAGTGCTTGATACTGGCGAGTGACGGGCTGTGGGACGTGGTGCCAAACGACACCGCGTGTGGGGCGGCACGGATGTGCCTGAGGGTGCGGAAGCCGCCGTCACCGCCCGGGTCTCCGGGGAGCGACGTGGCGGTGTACTCGGCGGTGGATGGGTCAGACAAGGCATGCTCGGACGCGTCGATTCTGCTGACGAAGCTGGCTCTGGCGAGGCATAGTACTGACAATGTGAGCGTGGTGGTGGTTAATTTGAGGAGAGAAACCGCAGTCCAATTCCATTTCCGACGATGA 1284 0.5522 MAGICCGVVGEGDTPAPVEPSRASRRRRLDILPSKYIADMAVPLPENGLKRQKLDLCAASPTQPRDCVNAVENIESSGVKDEEEQNKQPKGDKDEAKSTVLLLNSTATEGTSNEAINEFPKFGVTSVCGRRRDMEDAVSVRPSLCEEDGEKRKEFHYFGVFDGHGCSHVATICKDRLHEIVKEEIGGAREDLEWKSTMENSFARMDEEVQNWSQSNQNSTCRCELQTPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVPNDTACGAARMCLRVRKPPSPPGSPGSDVAVYSAVDGSDKACSDASILLTKLALARHSTDNVSVVVVNLRRETAVQFHFRR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1552 427 SMART PP2C_4 109 413 IPR001932 -
Bisa05g1552 427 MobiDBLite consensus disorder prediction 74 98 - -
Bisa05g1552 427 Pfam Protein phosphatase 2C 122 407 IPR001932 -
Bisa05g1552 427 CDD PP2Cc 121 415 IPR001932 -
Bisa05g1552 427 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Bisa05g1552 427 MobiDBLite consensus disorder prediction 76 97 - -
Bisa05g1552 427 ProSiteProfiles PPM-type phosphatase domain profile. 121 415 IPR001932 -
Bisa05g1552 427 SUPERFAMILY PP2C-like 115 416 IPR036457 -
Bisa05g1552 427 Gene3D - 116 422 IPR036457 -
Bisa05g1552 427 SMART PP2C_SIG_2 133 415 IPR001932 -
Bisa05g1552 427 FunFam Protein phosphatase 2C 37 116 422 - -
Bisa05g1552 427 PANTHER PROTEIN PHOSPHATASE 93 415 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1552 Bisa-ChrBisa05 28442306 28444038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1552 1 360 PP2C-type Phosphatase Gene Family AT3G11410 61.186 8.05e-147 421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1552 05 28442306 28444038 Bisa05g1552 05 28442306 28444038 CCT
Bisa05g1552 05 28442306 28444038 Bisa05g1552 05 28442306 28444038 ECH