Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1551 ATGGAGGCATCTCGTGAGTACCTGATGTGGATGAAGAGGAAGCAGATAATGTTGAGGTCACATGAAAGGACGTCGTCGTCGTCATCATGGGAAGAGAGGGCTTTTGCAGAGGACGCAGCTAGGATTCTTGGAGGGTGCATATGGCCTCCCAGGTCTTACTCTTGCAGTTTCTGCAAGAGAGAGTTCAGGTCTGCCCAAGCTCTCGGAGGTCACATGAATGTCCACAGGAGAGACAGAGCTAAGCTCAAACAACAAACCTTGATTGGCCCGAAACCAGATCAAGAGGTAACCATCAATGGAGCCTACCGGGAAGAACATTTCAAAGGCTTTAGTCAAGGTCATGGTAATTATGTCGACACAGGTTTGTCTATGGGATTACTACCAACTGAGGAAGCCATAAGCTGTAAGAGAGCTAAGATTTCCAATATTTCTTCAGTACTACCAGTCTTCCTCAAGCCATGTTCAAATGATCATAGAGGCCGGGTTTTTCAGTCTGCAGAAATAGAACTCGGAGTTAATAAGCCTAAAATGGAAGACCTGGATCTTGAACTCAGGCTGGGGAAACCACAGAAAGTTAAGTAG 582 0.4622 MEASREYLMWMKRKQIMLRSHERTSSSSSWEERAFAEDAARILGGCIWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAKLKQQTLIGPKPDQEVTINGAYREEHFKGFSQGHGNYVDTGLSMGLLPTEEAISCKRAKISNISSVLPVFLKPCSNDHRGRVFQSAEIELGVNKPKMEDLDLELRLGKPQKVK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1551 193 PANTHER OS07G0101800 PROTEIN 19 190 - -
Bisa05g1551 193 SUPERFAMILY beta-beta-alpha zinc fingers 50 79 IPR036236 -
Bisa05g1551 193 Gene3D Classic Zinc Finger 50 107 - -
Bisa05g1551 193 SMART c2h2final6 53 75 IPR013087 -
Bisa05g1551 193 Pfam C2H2-type zinc finger 53 77 - -
Bisa05g1551 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Bisa05g1551 193 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1551 Bisa-ChrBisa05 28419089 28419670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1551 6 192 C2H2 Transcription Factor Family AT5G06070 40.254 1.15e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa05g1551 zf-C2H2_6 8e-07 CL0361