Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1546 ATGCACAAGTACAAACTTAGGACAACGACGGGGTTTGGCTCTTCATGCGGAGCATGCAAGTTCCTCAGAAGAAAGTGCACCAGTGACTGTATATTTGCTCCTTACTTTTCCTATGACCAGGCTGCAACCCATTTTGCAGCAGTGCACAAGGTTTTTGGTGCTAGTAACGTCTCTAGGCTACTGCTACACCTACTGGTGCAGAATAGAAGTGATGCTGCCATTACTGTATCTTACGAAGCTCTGGCGTGGATGCAGGATCCTGTATATGGTTGCATTGCTCACATCTTTTCACTGGAACAACAGGTTAGAGGCTTGCAAGAGGAAATAGATAATCTTGGAAATCTCATGGCCAATTCTACTCTTGGTGTTGCTGGTTATGGTGGCAGTTTTCAAGCCCAAACGAGCAGACCCCCAAACGGGGTAGAATTTTCCTGGCATCAAGATGCAACAAGTACACAATTTTATCATGATCAACTGGCTAATCTACTTTCTCACCATGGAAGTGCAGAAGCCTATTGA 519 0.4509 MHKYKLRTTTGFGSSCGACKFLRRKCTSDCIFAPYFSYDQAATHFAAVHKVFGASNVSRLLLHLLVQNRSDAAITVSYEALAWMQDPVYGCIAHIFSLEQQVRGLQEEIDNLGNLMANSTLGVAGYGGSFQAQTSRPPNGVEFSWHQDATSTQFYHDQLANLLSHHGSAEAY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1546 172 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Bisa05g1546 172 Coils Coil 95 115 - -
Bisa05g1546 172 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
Bisa05g1546 172 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1546 Bisa-ChrBisa05 28343122 28343738 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1546 13 161 AS2 family AT5G06080 57.047 8.97e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g1546 LOB 3.7e-34 No_clan