Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1542 ATGGCGAATCGGTGGTGGGCCGGGAACGTGGCAATGAGGCCCACGGACTCCTTACCGTCTTCTCCATCGCTTCAGTCGAGAAACCCAGAGCACGACCGCGGCGGATTGAGTCGTCTCGGGCTAAGACGCGAGCAAGACTTCCTCGAAAACCCCAATAACGCCACCGCCACGCCAACCAATAGCAGCAACACCATCGCCAACACCAACACCACCTCGCAGAGCCAGAACGCTGACGAAGACGACAGCAGAAACCTCAACGACCGCGACGCCCCCGAGGACCAAAATCTCAATCCCCACGACGCCGCCGAGCCCGGCAGCTCCGGCCGGAGGCCCCGAGGCCGCCCGCCGGGCTCCAAGAACAAGCCGAAGCCGCCGGTCGTCATAACCAAGGAGAGCCCCAACGCCCTGCGCAGCCACGTCATGGAAATCAGCAGCGGCAGCGACATCGCTGAGAGCCTCGCCGCCTTCGCGAACCGGCGGCACCGCGGGGTGTCAGTGCTCAGCGGGAGCGGCATCGTGACCAACGTCACCCTCCGGCAGCCAGCGGCGCCGAGTGGGGTCATCGCGCTTCATGGAAGGTTTGAGATTTTGTCTCTGTCCGGTGCGTTTTTGCCGGCCCCCTCGCCGCCCGGGGCCACGGGGCTGACAGTTTACTTGGCCGGCGGGCAGGGGCAGGTGGTCGGAGGCACCGTGATGGGGTCGCTGGTGGCGGCGGGGCCAGTGTTGGTGATTGCAGCTACGTTTGCTAATGCTACTTATGAGAAGCTGCCATTGGAGGATGAGGCAGCTGGGGAAGAGGGGGAAGTGAAGGAAAAGCAGAATTCTGGAAACACGGGGGTTTCAGTTTCAGCATCTCAAGGTTTGACTGATCAAGTTTCAATGCCGATGTTCAGTAATTTGCCTCCAAATTTAGTACCAAGTAATAGTCAGATGCAGCATGATGTTTTCTGGGGGCCTCCAGCTCGTCCACCTTCTTACTGA 981 0.6086 MANRWWAGNVAMRPTDSLPSSPSLQSRNPEHDRGGLSRLGLRREQDFLENPNNATATPTNSSNTIANTNTTSQSQNADEDDSRNLNDRDAPEDQNLNPHDAAEPGSSGRRPRGRPPGSKNKPKPPVVITKESPNALRSHVMEISSGSDIAESLAAFANRRHRGVSVLSGSGIVTNVTLRQPAAPSGVIALHGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGTVMGSLVAAGPVLVIAATFANATYEKLPLEDEAAGEEGEVKEKQNSGNTGVSVSASQGLTDQVSMPMFSNLPPNLVPSNSQMQHDVFWGPPARPPSY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1542 326 ProSiteProfiles PPC domain profile profile. 133 271 IPR005175 -
Bisa05g1542 326 MobiDBLite consensus disorder prediction 1 133 - -
Bisa05g1542 326 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 260 - -
Bisa05g1542 326 CDD DUF296 137 248 IPR005175 -
Bisa05g1542 326 MobiDBLite consensus disorder prediction 14 30 - -
Bisa05g1542 326 MobiDBLite consensus disorder prediction 273 314 - -
Bisa05g1542 326 MobiDBLite consensus disorder prediction 262 326 - -
Bisa05g1542 326 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 249 IPR005175 -
Bisa05g1542 326 MobiDBLite consensus disorder prediction 31 45 - -
Bisa05g1542 326 Gene3D - 136 272 - -
Bisa05g1542 326 MobiDBLite consensus disorder prediction 48 79 - -
Bisa05g1542 326 MobiDBLite consensus disorder prediction 80 96 - -
Bisa05g1542 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 68 318 IPR014476 GO:0003680
Bisa05g1542 326 FunFam AT-hook motif nuclear-localized protein 136 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1542 Bisa-ChrBisa05 28184599 28185579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1542 1 326 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.622 9.13e-77 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1542 05 28184599 28185579 Bisa05g1542 05 28184599 28185579 CCT
Bisa05g1542 05 28184599 28185579 Bisa05g1542 05 28184599 28185579 ECH