Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1538 ATGCACAAGTACAAGCTTAGGACAACGACGGGGTTTGGCTCCTCATGCGGAGCATGCAAGTTCCTCAGAAGAAAGTGCACCAGTGACTGTATATTTGCTCCTTACTTTTCCTATGACCAGGCTACAACCCATTTTGCAGCAGTGCACAAGGTTTTTGGTGCTAGTAACGTCTCTAGGCTACTGCTACACCTACCGGTGCAGAATAGGAGTGATGCTGCCATTACTGTATCTTACGAAGCTCTGGCTCGGATGCAGGATCCTGTTTATGGTTGTGTTGCTCACATCTTTTCACTGCAACAACAGGTTAGAGGCTTGCAAGAGGAAATAGATAATCTTGGAAATCTTGTGGCCAATTCTACTATTGGTGTTGCTGGTTATGGTGGTAGTTTTCAAGCCCAAACAAGCAGACCCCCAAACGGGGTAGAATTTTCTTGGCAGCAAGATGCAACAAGTACACAATTTCATCATGATCAACTGGCTAATCTACTTTCTCACCATGGAAGTGCAGAAGCCTACCGAGGCTTGGAAAGACAGGTGAATTTAGAGTTTCCTAATGTGCTTAAATTGGACGATCAAGTATTTGAGGAGTCCGACCCTAATTCATTGGAGAAGCTCCTATCAGGAATTGACCAAGAGGTAAAACGAGCAGTCTCTCTTTTCAGCTTAGCTTTATACCAGTTTGGTTCCACAAATAGCCATCCTTTGCAGAAAGATTTACTTGGATTGTGCTAG 732 0.4426 MHKYKLRTTTGFGSSCGACKFLRRKCTSDCIFAPYFSYDQATTHFAAVHKVFGASNVSRLLLHLPVQNRSDAAITVSYEALARMQDPVYGCVAHIFSLQQQVRGLQEEIDNLGNLVANSTIGVAGYGGSFQAQTSRPPNGVEFSWQQDATSTQFHHDQLANLLSHHGSAEAYRGLERQVNLEFPNVLKLDDQVFEESDPNSLEKLLSGIDQEVKRAVSLFSLALYQFGSTNSHPLQKDLLGLC 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1538 243 Coils Coil 95 115 - -
Bisa05g1538 243 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 159 - -
Bisa05g1538 243 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
Bisa05g1538 243 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1538 Bisa-ChrBisa05 28131754 28132744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1538 13 161 AS2 family AT5G06080 59.060 1.50e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa05g1538 LOB 1.5e-35 No_clan