Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1532 ATGAGTTTTGTGCTCCGAGGGACAAGAGCAGATATAGAAAGTGGATTTCCTGAGTTTCTGCCTGAGAGGCAGGCATTGCGTGTTCATGCAGCACGTCCTACTAATTCTAATTCACTCACTTTTCTTGTCACAGTTCTCTTGCTATTCATGATACTGAACTCTCACCAGATGTCACCTAATTTTCTGCTTTGGCTAGTGCTGGGTGTCTTCCTGGTGGCTACTATGTTAAGGATGTATGCAACTTGTCAACAGCTTCAAGCTGAGGCCCAAGCCCATGCAGCAGCAACCAGTGGCCTCCTTGGCCATACTGAAGTGAGGTTTCATATGCCACCGTCAATAGCACTTACCACCCGAGGACGTCCACAAGGCCTTAGACTTCAGCTTGCACTTCTTGATCGGGAGTTTGATGACCTAGACTACGAAACTTTAAGAGCTCTGGATTCAGATAATATTATTCCCGCACATTCTATGACTGAGGAAGAGATAAATGCTCTTCCTGTCCACAAATACAAGGTTTCTGGTCCCGAAAACAGGAAATCTTCATCGCAACAGACCTCATCTTCAACATTTGCTGAGAATAAGCAAGATTCCTTAAATGCAGTTGGCAGCTTGAAAGCCTCCAATGATGAGCTGACTTGCAGTGTGTGTTTGGAGCAAGTTAATGTTGGGGATTTACTCCGTAGCTTGCCCTGCCTGCATCAGTTTCATGTTAATTGCATCGATCCCTGGCTGCGGCAACAAGGAACATGCCCCGTCTGTAAATTCAGAGCAGGATCTGCATGGTATGACGGTGAACAGGATGAAGTCGATGCTTCAGACATGGTTTGA 828 0.4601 MSFVLRGTRADIESGFPEFLPERQALRVHAARPTNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLVATMLRMYATCQQLQAEAQAHAAATSGLLGHTEVRFHMPPSIALTTRGRPQGLRLQLALLDREFDDLDYETLRALDSDNIIPAHSMTEEEINALPVHKYKVSGPENRKSSSQQTSSSTFAENKQDSLNAVGSLKASNDELTCSVCLEQVNVGDLLRSLPCLHQFHVNCIDPWLRQQGTCPVCKFRAGSAWYDGEQDEVDASDMV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1532 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 258 IPR013083 -
Bisa05g1532 275 SMART ring_2 213 253 IPR001841 -
Bisa05g1532 275 PANTHER TARGET OF ERK KINASE MPK-1 2 259 - -
Bisa05g1532 275 SUPERFAMILY RING/U-box 208 257 - -
Bisa05g1532 275 CDD RING-H2_PA-TM-RING 212 254 - -
Bisa05g1532 275 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Bisa05g1532 275 MobiDBLite consensus disorder prediction 172 194 - -
Bisa05g1532 275 Pfam Ring finger domain 212 254 IPR001841 -
Bisa05g1532 275 MobiDBLite consensus disorder prediction 176 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1532 Bisa-ChrBisa05 28030979 28035175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1532 1 275 C3H Transcription Factor Family AT3G55530 75.540 9.68e-140 392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1532 05 28030979 28035175 Bisa05g1532 05 28030979 28035175 ECH