Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1521 ATGATTGTTGTACAGCTTTTGATTTTCTTAAGGTTGTATCCCGTAGATGTTCATCTTTGTTGCAGAGGCGATAAGATGCGGAGGTATAGTCCAGCATACTATAGTCCTCCTAGGAGAGGATACGGTGGTGGAGGGAGAAGCCCTCCTAGGAGGGGATACGGTGGAGGTAGACGCAGGGAACAAAATCATGGGAGCCTTTTGGTTCGAAACATTCCTCTCGATTGCCGGTCTGAGGAACTTCGAGTTCCCTTTGAGCGATTTGGACCTGTTCGGGATGTTTACATTCCAAAGGACTATTACACTGGAGAACCTCGTGGATTTGCATTTGTGCAATTTGTGGATCCTTATGATGCCTCAGAGGCACAGTATCATATGAACGGACAGATCTTTGCTGGAAGGGAAATATCTGTTGTGGTTGCTGCTGAGACAAGGAAAAGACCAGAGGAGATGCGTCATAAGTCTAGGATCAGGGGACCAGTAGGACATGGGGCCCGAAGGTCAACTTATGGACGATCTTGGTCTCGCTCAGTTTCTAGATCACGCTCCCCACATTATCGGTCTGGTTCCAGAAGTCGACACCGCTCAAGGTCCTATTCTCCTGCCCCAAGACGGCGAGGTGACTATTCTATTTCCCCTAGAAGGCAACCAGCACACCCTAGGTCACCAAGAGGTCCTCCTGGGGAGCGAGATGGTGATCAAAAGCGGAGGTCATATTCTCCAGGTTATGGCAATGGCCCTGATTACAATCAAAGCAATGGATATGATGAAAAACCTATCATCGAGGTCACCGGTGGGGTCTAG 801 0.4894 MIVVQLLIFLRLYPVDVHLCCRGDKMRRYSPAYYSPPRRGYGGGGRSPPRRGYGGGRRREQNHGSLLVRNIPLDCRSEELRVPFERFGPVRDVYIPKDYYTGEPRGFAFVQFVDPYDASEAQYHMNGQIFAGREISVVVAAETRKRPEEMRHKSRIRGPVGHGARRSTYGRSWSRSVSRSRSPHYRSGSRSRHRSRSYSPAPRRRGDYSISPRRQPAHPRSPRGPPGERDGDQKRRSYSPGYGNGPDYNQSNGYDEKPIIEVTGGV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1521 266 MobiDBLite consensus disorder prediction 144 266 - -
Bisa05g1521 266 SMART rrm1_1 65 138 IPR000504 GO:0003723
Bisa05g1521 266 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 59 240 - -
Bisa05g1521 266 FunFam Serine/arginine-rich SC35-like splicing factor SCL30 isoform A 57 197 - -
Bisa05g1521 266 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 IPR000504 GO:0003723
Bisa05g1521 266 MobiDBLite consensus disorder prediction 185 199 - -
Bisa05g1521 266 SUPERFAMILY RNA-binding domain, RBD 61 171 IPR035979 GO:0003676
Bisa05g1521 266 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 64 142 IPR000504 GO:0003723
Bisa05g1521 266 MobiDBLite consensus disorder prediction 37 61 - -
Bisa05g1521 266 Gene3D - 56 175 IPR012677 -
Bisa05g1521 266 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1521 Bisa-ChrBisa05 27656358 27662276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1521 32 127 Eukaryotic Initiation Factors Gene Family AT3G11400 37.500 1.29e-09 55.8