Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1520 ATGCGGAAAAAGCGTTGCTTTCACACTTGCATATTTGTTTTTCCCTTGTCAGGGGCTCGCCGAATAAGCACGAAGCAGTTCTGGGTTCTCACTCTTCTGAGCCTCAAGCTCATGGGTTGCTGCTTTAGTGCGAGGGTCAAAGCTGAAAGCGCTCCACGCCTTGCTTTGAGTTCAGACTATGGTAGCAAAGAAGATGGTTTGAGTGGTTTAAGCAGCAAGGTCTCCAATCCCTCAGTGGCTCCAACGCCTCGGACAGAGGGTGAGATCTTGCAGTCCTCCAATATGAAGAGTTTCAGCTACAGTGAGCTCAAAACAGCTACAAGGAACTTTCGTCCAGATAGTGTGGTGGGTGAAGGTGGGTTTGGTAGTGTGTTTAAGGGCTGGATCGATGAACATTCACTTGCGCCTGCTAGACCAGGGACCGGGATTATGATTGCTGTGAAGAAGCTTAACCAAGAAAGCTTCCAGGGACACAGTGAATGGTTGACAGAAATCAACTTCCTGGGCCAGCTGCATCATCCTAATCTTGTGAAATTGATTGGCTACTGCTTGGAGGACGATCATCGGCTTTTGGTATATGAATTTTTGACCAAAGGCAGCTTGGATAATCATTTATTCAGGAGGGCATCTCATGTTGAGCCACTTTCTTGGGGAATCCGTATGAAGGTTGCTCTTGACGCTGCTAAGGGTCTTGCGTTTCTTCACAGTGATGAAGTAAAAGTAATCTACCGAGACTTGAAAACTTCTAATATCTTGCTTGATTCGAACTTCAATGCAAAACTCTCTGATTTTGGGTTGGCAAAGGATGGACCTGCAGGTGATAAGAGCCATGTCTCTACAAGGGTAATGGGCACATATGGCTACGCCGCTCCCGAGTATATGGCTACAGGTCACTTAACCAAGAAAAGCGATGTATACAGTTTCGGGGTAGTTATCCTCGAAATTCTATCAGGCAAACGGGCAGTGGACAAGAACCGGCCAACCAGGGAACAGAATTTGGTCGACTGGGCCAAGCCTTACCTTTCAAGCAAACGGCGAATTTTCCAAGTCATGGATGCTCGCATCGAGGGCCAATACCCTGTGCGCCAGGCGATGAAATTGGCTAACATTGCGATTCAATGCCTCTCTGTAGAACCCAGATTTAGACCCCCCATGGCTGAGGTGGTAAGAGTATTGGAGCAACTTCAGGATTCAACTGACACAGGTAGCTCAAGCAGCAGCAGTAGTAGTAGTAGTCGTCCTAGACAGCATAAGACAAGTGTGAATGGGTCTTTAAATGGAGAAGGTTCTTCTAATACGACATCGTCTGCTTCTCCTCTTCCTACATAA 1329 0.471 MRKKRCFHTCIFVFPLSGARRISTKQFWVLTLLSLKLMGCCFSARVKAESAPRLALSSDYGSKEDGLSGLSSKVSNPSVAPTPRTEGEILQSSNMKSFSYSELKTATRNFRPDSVVGEGGFGSVFKGWIDEHSLAPARPGTGIMIAVKKLNQESFQGHSEWLTEINFLGQLHHPNLVKLIGYCLEDDHRLLVYEFLTKGSLDNHLFRRASHVEPLSWGIRMKVALDAAKGLAFLHSDEVKVIYRDLKTSNILLDSNFNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVILEILSGKRAVDKNRPTREQNLVDWAKPYLSSKRRIFQVMDARIEGQYPVRQAMKLANIAIQCLSVEPRFRPPMAEVVRVLEQLQDSTDTGSSSSSSSSSSRPRQHKTSVNGSLNGEGSSNTTSSASPLPT 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1520 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Bisa05g1520 442 PANTHER OS01G0588500 PROTEIN-RELATED 81 396 - -
Bisa05g1520 442 ProSitePatterns Protein kinases ATP-binding region signature. 116 149 IPR017441 GO:0005524
Bisa05g1520 442 Gene3D Phosphorylase Kinase; domain 1 85 195 - -
Bisa05g1520 442 MobiDBLite consensus disorder prediction 66 87 - -
Bisa05g1520 442 Gene3D Transferase(Phosphotransferase) domain 1 196 419 - -
Bisa05g1520 442 MobiDBLite consensus disorder prediction 395 442 - -
Bisa05g1520 442 FunFam Serine/threonine-protein kinase BIK1 77 195 - -
Bisa05g1520 442 CDD STKc_IRAK 116 395 - -
Bisa05g1520 442 SUPERFAMILY Protein kinase-like (PK-like) 94 403 IPR011009 -
Bisa05g1520 442 ProSiteProfiles Protein kinase domain profile. 110 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1520 442 FunFam Probable serine/threonine-protein kinase PBL8 196 412 - -
Bisa05g1520 442 SMART serkin_6 110 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1520 442 Pfam Protein tyrosine and serine/threonine kinase 114 392 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1520 Bisa-ChrBisa05 27653405 27656257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1520 88 437 Glycoside Hydrolase AT3G07070 46.439 1.93e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa05g1520 PK_Tyr_Ser-Thr 6.2e-48 CL0016