Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1506 ATGTCGCTTGAGTACCACAAATCTGTGTTCGAGGAAGAAGACGGCTCACAGAGCACTAACGGCTTCAGCAACGAATCTGCCACAACCCATTCTCCTCCTCTAAGTGGTACTGCAAGTGGGTATGTTTACAAGGCCACAAACTATCATCCTCAGGAGGCACAATCTCTCATCAACTTCAAACCCAATGGTTACAACAATCTCATCAATGGAGGTGAATCTTTGCTCAGCTTCAAGCAGAAAGAGTACAGTGGGTGGGAGAACAATTTGCATCAGTGGAATCAGATTACTACTCCAAGAGGCAATTCAATTTCAGACCCACGTTTGATTCAGAATTTCAATTGTATTCAAACTGCTAGTGGCTATAATGGAACAAGCGAGAAGCTGCATCAAGGTGAGGTTTCTTATGGGTGGCTATACTCTGAACCAAATGTAAATGTTCCCTCTGATAATAGCCTTCAGGAGTCTTCAGGAGCAAAAGAGGCATCCTTCAATAAGCGTCCTTCTATGGGAGGGAGCATGCAGGCCTCGAAGAAGCAATGCACCAAAACCTCAAAAGCTACAAAGTCAAGTCAATCCAAGGATCCTCAGAGTATTGCAGCCAAGAATAGAAGAGAGAGGATAAGTGAGCGACTCAAGATACTACAAGAACTGGTTCCTAATGGCTCCAAGGTTGATTTGGTTACCATGTTGGAGAAAGCCATTAGTTATGTGAAGTTTCTTCAACTACAAGTGAAGGTGTTGGCAACTGATGAATTTTGGCCAGTGCAAGGAGGAAAAGCACCTGATATCACTCAAGTAAAAGAAGCCATTGACGCCATTCTCTCTTCCCAAAGAGACAGAAATTTAAACAACTGA 855 0.4339 MSLEYHKSVFEEEDGSQSTNGFSNESATTHSPPLSGTASGYVYKATNYHPQEAQSLINFKPNGYNNLINGGESLLSFKQKEYSGWENNLHQWNQITTPRGNSISDPRLIQNFNCIQTASGYNGTSEKLHQGEVSYGWLYSEPNVNVPSDNSLQESSGAKEASFNKRPSMGGSMQASKKQCTKTSKATKSSQSKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDITQVKEAIDAILSSQRDRNLNN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1506 284 CDD bHLH_AtIND_like 192 254 - -
Bisa05g1506 284 MobiDBLite consensus disorder prediction 146 197 - -
Bisa05g1506 284 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 274 - -
Bisa05g1506 284 MobiDBLite consensus disorder prediction 146 204 - -
Bisa05g1506 284 FunFam Transcription factor bHLH83 189 248 - -
Bisa05g1506 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Bisa05g1506 284 Pfam Helix-loop-helix DNA-binding domain 198 241 IPR011598 GO:0046983
Bisa05g1506 284 SMART finulus 197 246 IPR011598 GO:0046983
Bisa05g1506 284 Gene3D - 175 248 IPR036638 GO:0046983
Bisa05g1506 284 MobiDBLite consensus disorder prediction 14 35 - -
Bisa05g1506 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 189 250 IPR036638 GO:0046983
Bisa05g1506 284 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1506 Bisa-ChrBisa05 27322781 27324517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1506 40 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 48.092 9.80e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa05g1506 HLH 8.9e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1506 05 27322781 27324517 Bisa05g1506 05 27322781 27324517 CCT
Bisa05g1506 05 27322781 27324517 Bisa05g1506 05 27322781 27324517 ECH