Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1498 ATGCTCATGGCCGTCGAAGCCGTTAGCCTCCTCAGAGGACTCATCCTTCTCCTGTCACTTCGGTCGTCATCATCGCCTACCTCTTCCTCATCTTCATCTCCTTTGCCAGAGTCAAAATCCGTGACATCGAACACTTCGCGTACATGCTCTCGAAGTATACTTGTTAAATTTGATTTACTCTGTTTCGAAGTTTGCATTGATGGCGGCTCTTTTTTTTTATATGAATATATGTATGTGTCATGCTCTGAACTGGAAGTGTGGTTTCTATTGTACATGGTTTACGCCACGGATGTGAGATCGGAGAGTTACAAAGTGTTTGATCGGTGCAAGAGGAAGGTGTTAGTGACGGCAAATCTGATGGTGATGGTGGAGCTATTCGTGAAGGATTTTCTCGGCAGGGACAAGGTGCTGGATACAGAGATCGAGATGAATCCAAAGACGAAGAAGGCTACAGGGTTCGTAAAGAATCCTGATGTGCTGGTAGGAAAGTTAAAGCAACTAGCGATCTTAAAAGAGTTCAGGGATGAATCGTCTGATATCAGAATCAGAGACCGCGAATCGGACCATGATTTTATGGCTATTTGCAAGCAGACATGCACGTTAGTGGCCTCTGAAGCATTTGATAGGAACGACATGAAGAGTTCCTCATCAGGAGGATTAAGAAAAGGCTCATGGACCAAAGAAGAAGATGATCTTCTCAAAGCCTGCATTCAAAAGCACGGCGAGGGACAATGGTACCTCGTCCCTGAAAGAGCAGGGTTAAAAAGGTGTCGGAAAAGCTGTAGATTGAGATGGCTGAATTATCTCAAACCAGAAATCAATAGAGGGGATTTCACTGAGGATGAAGTTGATATGATTCTAAGGTTCCATAGACTTCTGGGGAACAGATGGTCGTTGATTGCTGGAAGGCTTCCTGGAAGGACTGCGAATGATGTAAAGAACTATTGGTTCACCAAATTGCGAGGTAAGGAAGAAACCTCTGACAGCAAGAAGAAGAACAAGAAGAAAGAAGAAGCTAAGGACATGTCAAGTGGTGGTCATGATGATCATGATCATGTAATATTGATAAAGCCTAAGCCACGGAGGTTCTCGAAGAATTCGGCGTGGCCGAGACAGAGACCCATCTTTGCAGATGAAGCTACCACTGTGCAGCCTGAATTACTCAACGTTCTTAGTGCAAAAGAGGACAGCACAGAGCACTTATTAGGAAATGTTGATAAGGTAAGAGAATACGGTGGTCCTGCACAACCATATGTGGCCATTGCTAATGTGTCGCAATCAGAGATATGGACAAGTTTGCAAGAAGACAATAGTATGGAATTGAAAGAAGAGGGAGGCTCTTTAGAACAAGAAGACTTGAATTCCACATTAATGCTTCCCTGGAACCAGGAATTTATTGAGGCACCCAATCTCGAGGACCATATTTATAGTGATTTTTCTTCCCAAATAAGCCTTTGGGATTTTCCATTTATGTAA 1476 0.435 MLMAVEAVSLLRGLILLLSLRSSSSPTSSSSSSPLPESKSVTSNTSRTCSRSILVKFDLLCFEVCIDGGSFFLYEYMYVSCSELEVWFLLYMVYATDVRSESYKVFDRCKRKVLVTANLMVMVELFVKDFLGRDKVLDTEIEMNPKTKKATGFVKNPDVLVGKLKQLAILKEFRDESSDIRIRDRESDHDFMAICKQTCTLVASEAFDRNDMKSSSSGGLRKGSWTKEEDDLLKACIQKHGEGQWYLVPERAGLKRCRKSCRLRWLNYLKPEINRGDFTEDEVDMILRFHRLLGNRWSLIAGRLPGRTANDVKNYWFTKLRGKEETSDSKKKNKKKEEAKDMSSGGHDDHDHVILIKPKPRRFSKNSAWPRQRPIFADEATTVQPELLNVLSAKEDSTEHLLGNVDKVREYGGPAQPYVAIANVSQSEIWTSLQEDNSMELKEEGGSLEQEDLNSTLMLPWNQEFIEAPNLEDHIYSDFSSQISLWDFPFM 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1498 491 ProSiteProfiles Myb-like domain profile. 270 320 IPR001005 -
Bisa05g1498 491 MobiDBLite consensus disorder prediction 22 44 - -
Bisa05g1498 491 Gene3D - 222 274 - -
Bisa05g1498 491 SUPERFAMILY Homeodomain-like 220 316 IPR009057 -
Bisa05g1498 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 274 324 IPR017930 -
Bisa05g1498 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 220 273 IPR017930 -
Bisa05g1498 491 FunFam Myb transcription factor 222 274 - -
Bisa05g1498 491 ProSiteProfiles Myb-like domain profile. 217 269 IPR001005 -
Bisa05g1498 491 CDD SANT 278 320 IPR001005 -
Bisa05g1498 491 Gene3D - 277 345 - -
Bisa05g1498 491 SMART sant 221 271 IPR001005 -
Bisa05g1498 491 SMART sant 274 322 IPR001005 -
Bisa05g1498 491 Pfam Myb-like DNA-binding domain 275 318 IPR001005 -
Bisa05g1498 491 Pfam Myb-like DNA-binding domain 222 269 IPR001005 -
Bisa05g1498 491 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 217 357 - -
Bisa05g1498 491 CDD SANT 224 269 IPR001005 -
Bisa05g1498 491 MobiDBLite consensus disorder prediction 326 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1498 Bisa-ChrBisa05 27064708 27069759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1498 216 368 MYB Transcription Factor Family AT1G66370 59.740 1.05e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g1498 Myb_DNA-binding 3.3e-15 CL0123