Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1492 ATGAAGAGAGGTTTCCGAGATACCTGTGCTGGTGCTGCTTCTGGTTCTAGATATGTAGGATTTGGAGGAGGAAATGGGAATAACTATATTGGTGGCGGTGCTGGTTTAAAAGCCGAATGCTCCTCAATGGCGAGTGAGAAGGCGACGATGTGGGAAGAAGAACACGATGCGTCGGGTGGGATGGACGAGTTGCTTGCGGCTTTGGGTTACAAGGTGCGCTCGTCGGACATGGCTGATGTGGCGCAGAAGCTTGAGCAGCTGGAGATGGTTATGGGCACTGCTCAGGAAGATGGGATATCCCATCTTGCTTCTGACACCGTCCACTATGACCCAACCGATCTCCATGGTTGGGTTCAGAGCATGCTCACCGAGCTCAACTTTTCGCCCAATTGTCTCGATCCATCGGCCCTGTTAGCGAACCAGCAAATCGATGACCCTATTCTTGCTCCGTCGGTTTCATCCGTCATATCCACCGCTAATTTCTCCAATTCTCAGCAGCAGATTGAGAGTCAATCAAACATTTACAACGATGATTCCGAGTACGACCTCAGAGCAATTCCTGGTATGGCGGTATATCCACAACGCGAAACGATCCCTGAGAGAGATGACGGCAATAAACGATTGAAAAGTTCACCAATCGAATCCGATTCCCTGCCGGTGTTACCGTCAGCTTCGTCATCGCCGCCGCCGGCGGCCGTGACAGATCACGCACGCCCGGTGGTTCTGGTTGACTCCCAAGAAAACGGTGTGCGTCTAGTGCACACGCTGATGGCATGTGCAGAGGCGGTTCAACAGAACAATCTCAAGCTGGCAGACGCGCTTGTGAAGCACGTGGGCTTGCTCGCGACGTCTCAAGCCGGAGCAATGAGGAAGGTAGCCTCCTACTTCGCTCAAGCTTTAGCTCGTCGGATTTACGGAATCTACCCGCAAGAATCCCTTGATTCCTCCTTCTCCGATGTTCTGCATATGCATTTCTACGAGTCCTGCCCTTACCTGAAATTCGCTCATTTCACGGCGAATCAGGCCATTCTCGAAGCCTTCGCCACCTCGAACAGAGTCCACGTCATCGATTTCGGGCTCAAGCAGGGGATGCAATGGCCAGCATTGATGCAGGCCCTCGCATTGCGTCCCGGCGGTCCTCCGACGTTCCGTCTCACCGGAATCGGACCCCCTCAGCCGGACAACACGGACGCTCTGCAACAAGTGGGGTGGAAATTGGCGCAATTGGCCAAGACAATCGGTGTTCAATTCGAATTCCGTGGATTCGTCTGCACCAGTCTGGCCGATCTCGAACCGTCCCTGCTCGAGATCCGACCCGGAGAGGCCGTCGCTGTGAACTCCGTTTTCGAGCTCCACAGCCTCTTGGCTCGACCTGGCTCCATCGAGAAGGTCTTGAACACCATCAAGGTCATGAATCCGAAGATCGTGACTGTGGTAGAGCAAGAAGCGAACCACAACGGGCCGGTTTTCTTGGATCGGTTCACAGAGGCACTACACTACTTCTCGAACTTGTTCGATTCGCTGGAGGGTTCGTCGTCATCGCCGTCGTCGGCGGGGTTAACTACGGCAAATCAGGACGTGATAATGTCGGAACTGTATCTGGGGAGACAGATTTGCAACGTGGTAGCGTGTGAAGGGTCGGAGCGCGTGGAGCGGCACGAGACGCTGAATCAGTGGAGGGGGAGGATGGAATCGGCTGGGTTCGACCGAGTTCATCTTGGTTCGAATGCGTTCAAGCAGGCAAGCATGTTGTTGGCAGTGTTTGCCGGTGGAGATGGGTATAGGGTGGAAGAGAAAAACGGGTGCCTCATGCTTGGGTGGCACACCCGGCCCCTCATAGCCACGTCGGCGTGGAAAATTCCGGCCGGCGAGCCGTAG 1878 0.5469 MKRGFRDTCAGAASGSRYVGFGGGNGNNYIGGGAGLKAECSSMASEKATMWEEEHDASGGMDELLAALGYKVRSSDMADVAQKLEQLEMVMGTAQEDGISHLASDTVHYDPTDLHGWVQSMLTELNFSPNCLDPSALLANQQIDDPILAPSVSSVISTANFSNSQQQIESQSNIYNDDSEYDLRAIPGMAVYPQRETIPERDDGNKRLKSSPIESDSLPVLPSASSSPPPAAVTDHARPVVLVDSQENGVRLVHTLMACAEAVQQNNLKLADALVKHVGLLATSQAGAMRKVASYFAQALARRIYGIYPQESLDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFATSNRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAKTIGVQFEFRGFVCTSLADLEPSLLEIRPGEAVAVNSVFELHSLLARPGSIEKVLNTIKVMNPKIVTVVEQEANHNGPVFLDRFTEALHYFSNLFDSLEGSSSSPSSAGLTTANQDVIMSELYLGRQICNVVACEGSERVERHETLNQWRGRMESAGFDRVHLGSNAFKQASMLLAVFAGGDGYRVEEKNGCLMLGWHTRPLIATSAWKIPAGEP 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1492 625 Coils Coil 77 97 - -
Bisa05g1492 625 MobiDBLite consensus disorder prediction 192 233 - -
Bisa05g1492 625 ProSiteProfiles GRAS family profile. 243 619 IPR005202 -
Bisa05g1492 625 SMART DELLA_2 62 135 - -
Bisa05g1492 625 MobiDBLite consensus disorder prediction 196 210 - -
Bisa05g1492 625 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 219 615 IPR005202 -
Bisa05g1492 625 Gene3D - 60 125 IPR038088 -
Bisa05g1492 625 MobiDBLite consensus disorder prediction 216 230 - -
Bisa05g1492 625 Pfam Transcriptional regulator DELLA protein N terminal 62 129 IPR021914 -
Bisa05g1492 625 Pfam GRAS domain family 252 619 IPR005202 -
Bisa05g1492 625 FunFam DELLA protein GAI 60 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1492 Bisa-ChrBisa05 26848595 26850472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1492 46 620 GRAS Transcription Factor Family AT2G01570 60.168 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa05g1492 GRAS 4.4e-139 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1492 05 26848595 26850472 Bisa05g1492 05 26848595 26850472 CCT
Bisa05g1492 05 26848595 26850472 Bisa05g1492 05 26848595 26850472 ECH
Bisa05g1492 05 26848595 26850472 Bisa02g3858 02 92618229 92620505 ECH