Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1471 ATGAGGCCTCTGCCGCCACTTATCTTCTTCCTCCCTGCTTTCTCGCTGTTTCTCTTCGCCATCGTAGGCGCAGATCTAGCATCTGACAGAGCCGCCCTGGTCGCTCTGCGCTCCTCAGTGGGTGGCCGTTCACTCCTCTGGAATCTCTCTCAGACCAATCCTTGCTTATGGACTGGGGTGATATGTGTGAACAACAGCGTCACTACTTTGCGGTTTCCTGCTATGGGTCTATCTGGGAAGCTCCCACTGGGAATTGGGAATCTCACTCAGCTTCGGACTCTGTCTCTTCGCTTCAACAAGCTCTCTGGGCCGATACCGGACGACTTTGCCAATCTCGTTACCCTTCGGAACCTCTATTTGCAGGGGAATTCCTTCTCGGGTGAAATTCCTGATTTCCTTTATGGTATGCAGAACTTGGTTCGTTTGAATTTGGCTAGCAACAATTTCAGTGGTGAGATTTCGCCCAAGTTTAATAACCTCACGAGGTTAGCGACCCTGTATTTGGAGAACAACCACTTCACTGGGTCCATTCCTGACTTGAATGCCCCACCTCTTGATCAGTTCAATGTTTCGTCGAATCGGCTAAACGGGTCCATTCCCGTGAGGTTTTCGCGCTTGAATGCAAGTGCTTTTGACGGCAATCTCCTTTGCGGGAAGCCCTTGCAAGCATGCCCTGGAACGGAGAGTGGGAAGAAAAAGTTATCTGGTGGAGCAATTGCAGGAATTGTAATTGGCTCTTTGGTCGGATTTCTGTTGATTCTGCTCCTTCTGTTCTTCTTGTGCCGAAAAAGGAGCAAAAAAGACCAGGATTCTAGGGATAAAGCCCCGGAGAAGCAAGCTGAGGTTGAAATTCCGCAAGAAAAGACAACTAGAGATATTGAGAATGCTGGAGCAAGTAACTCAGCAACAGCCAGAGGTGCTGATGCTAAGACTGGTAGGAGTAAGAGATTGGTGTTTTTTGGGACTGTCAACAAATCGTTTGATCTGGAGGATTTGTTAAGGGCGTCCGCAGAAGTACTGGGGAAGGGGACATTTGGAACCACATATAAGGCTACTTTGGAAATGGGGATGCTTGTGGCAGTGAAGAGGTTGAAGGATGTGACTTTGCCAGAAAATGAATTTAGAGAAAAAATTGAGGAAGTAGGGAAGATGGTTCATGAGAACTTGGTCCCACTCAGAGCTTACTATTATAGCAGGGAAGAAAAGCTTCTTGTCTATGATTACATGCCCATAGGAAGCTTGTCTGCCCTCTTACATGCTAATAATGGAGCTGGCAGAACTCCACTAAACTGGGAAACAAGGTCTGGCATTGCCCTTGGTGCAGCCCGGGGGATTGCATACCTACACTCACAGGGCCCTAATGTCTCCCATGGAAACATCAAGTCATCAAATATCCTTCTCACCAAATCTTTTGAAGCTCGCGTTTCTGACTTTGGCCTAGCTCATCTTGCACTCCCCACCTCCACACCCAACCGTGTTTCTGGTTATCGCGCCCCAGAGGTCACTGATACTCGCAAAGTATCCCAGCAAGCAGATGTTTATAGCTTTGGTATAATGCTCTTGGAGCTGCTTACAGGGAAGGCTCCAACACATTCCTCCTTGAATGAAGAAGGGGTAGACCTCCCAAGATGGGTCCAATCTATTGTTCAAGAGGAATGGAACACCGAAGTTTTTGACATGGAGCTTCTCAGATACCAGAATGTTGAGGAGGAAATGGTCCAGCTCTTGCAGCTTGCACTTGATTGTGCTGAACAGTACCCTGACAAGCGGCCTTCAATGGACGTGGTGGCAAGCAAAATTGAGAGGATTTGTCATTCTAGTATAGAGAAAGAGGAAGAGAAAATTCATTCTTTCAAAGATTCAGATAATGGGCTTTCCTCACCCTAG 1887 0.4754 MRPLPPLIFFLPAFSLFLFAIVGADLASDRAALVALRSSVGGRSLLWNLSQTNPCLWTGVICVNNSVTTLRFPAMGLSGKLPLGIGNLTQLRTLSLRFNKLSGPIPDDFANLVTLRNLYLQGNSFSGEIPDFLYGMQNLVRLNLASNNFSGEISPKFNNLTRLATLYLENNHFTGSIPDLNAPPLDQFNVSSNRLNGSIPVRFSRLNASAFDGNLLCGKPLQACPGTESGKKKLSGGAIAGIVIGSLVGFLLILLLLFFLCRKRSKKDQDSRDKAPEKQAEVEIPQEKTTRDIENAGASNSATARGADAKTGRSKRLVFFGTVNKSFDLEDLLRASAEVLGKGTFGTTYKATLEMGMLVAVKRLKDVTLPENEFREKIEEVGKMVHENLVPLRAYYYSREEKLLVYDYMPIGSLSALLHANNGAGRTPLNWETRSGIALGAARGIAYLHSQGPNVSHGNIKSSNILLTKSFEARVSDFGLAHLALPTSTPNRVSGYRAPEVTDTRKVSQQADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQEEWNTEVFDMELLRYQNVEEEMVQLLQLALDCAEQYPDKRPSMDVVASKIERICHSSIEKEEEKIHSFKDSDNGLSSP 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1471 628 Pfam Protein kinase domain 337 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1471 628 SUPERFAMILY L domain-like 47 207 - -
Bisa05g1471 628 CDD STKc_IRAK 340 603 - -
Bisa05g1471 628 MobiDBLite consensus disorder prediction 269 290 - -
Bisa05g1471 628 FunFam Probable inactive receptor kinase RLK902 26 181 - -
Bisa05g1471 628 MobiDBLite consensus disorder prediction 269 308 - -
Bisa05g1471 628 Gene3D Phosphorylase Kinase; domain 1 299 408 - -
Bisa05g1471 628 SUPERFAMILY Protein kinase-like (PK-like) 338 598 IPR011009 -
Bisa05g1471 628 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Bisa05g1471 628 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Bisa05g1471 628 MobiDBLite consensus disorder prediction 292 307 - -
Bisa05g1471 628 FunFam Probable inactive receptor kinase At1g48480 409 611 - -
Bisa05g1471 628 PANTHER OS05G0588300 PROTEIN 11 605 - -
Bisa05g1471 628 FunFam pollen receptor-like kinase 1 303 408 - -
Bisa05g1471 628 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1471 628 Pfam Leucine Rich Repeat 90 112 IPR001611 GO:0005515
Bisa05g1471 628 Gene3D Ribonuclease Inhibitor 26 232 IPR032675 -
Bisa05g1471 628 Gene3D Transferase(Phosphotransferase) domain 1 409 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1471 Bisa-ChrBisa05 26407143 26409897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1471 8 603 Receptor kinase-like Gene Family AT1G48480 56.942 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa05g1471 Pkinase 3.2e-37 CL0016