Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1457 ATGAACGACTTGATTTCAGAGTCCTTCAGAAAATACACCAACGGGAAGCAACAACCGGACGCAGAAGATGTGGAGACAGGAACTGGAAGCATCAATCTTGATAAGTTCTTTGAGGATGTGGAGAATGTAAAAGAAGACATGAAGCAAGTTGAGAAGCTCTACAGAAGATTGCAAGAAGCCAACGAAGAAAGCAAGAAGGTGCACAATGCTAAGACCATGAAAGAGCTGAGAGCCAGGATGGACAAAGACGTTGAACAGGTGCTAAAACGAGTCAAAACAATTAAAGCCAAACTTGAAGCCATAGAGCGTTCCAATGCAGAACAGAGAACCCAGCCAGGGTGTGGTCCAGGTTCTTCAGCAGACCGATCCAGGACCCAAGTGGTGAGTGGGTTAGGGAAGAAGCTAAAGGACATGATGGGCGATTTTCAAGGCTTGAGAACAAGAATTCAGCAGGAGTACAAAGAAACAATTGAACGCAGGTACTTCACAATCACAGGAGAGAAAGCAGAAGATGAGACCATAGAGAACCTGATATCAAGCGGAGAAAGCGAGAGTTTCCTTCAAAGGGCAATTCAGGAACAGGGGAGGGGTCAGATAATGGACACCATATCAGAGATCCAAGAGAGGCATGACGCAGTGAGGGAGATAGAGAAGAACTTGATGGAGCTTCACCAGGTTTTTCTGGACATGGCTGCTCTAGTGGAAGCTCAGGGACAAGAGCTTAACAACGTAGAGACCAGCGTGAAGCAAGCTTTTTCTTTTGTGGCGCGAGGCACGCAACAACTTGAGGAGGCCAAGGAGCATAAGAAGAATACCCGGAAGTGGACATGCATTGCTATTCTTCTTTGCATTCTCTTCTTCATTATCATCTTCATTCCTCTGTTCTCATACATTTTACCAGTGTTGTTGAAATAA 915 0.4536 MNDLISESFRKYTNGKQQPDAEDVETGTGSINLDKFFEDVENVKEDMKQVEKLYRRLQEANEESKKVHNAKTMKELRARMDKDVEQVLKRVKTIKAKLEAIERSNAEQRTQPGCGPGSSADRSRTQVVSGLGKKLKDMMGDFQGLRTRIQQEYKETIERRYFTITGEKAEDETIENLISSGESESFLQRAIQEQGRGQIMDTISEIQERHDAVREIEKNLMELHQVFLDMAALVEAQGQELNNVETSVKQAFSFVARGTQQLEEAKEHKKNTRKWTCIAILLCILFFIIIFIPLFSYILPVLLK 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1457 304 MobiDBLite consensus disorder prediction 105 126 - -
Bisa05g1457 304 Coils Coil 84 111 - -
Bisa05g1457 304 Coils Coil 33 70 - -
Bisa05g1457 304 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 30 160 - -
Bisa05g1457 304 CDD SNARE_syntaxin1-like 202 264 - -
Bisa05g1457 304 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
Bisa05g1457 304 Gene3D - 33 160 - -
Bisa05g1457 304 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Bisa05g1457 304 CDD SynN 33 190 IPR006011 GO:0016020
Bisa05g1457 304 SMART SynN_4 28 154 IPR006011 GO:0016020
Bisa05g1457 304 PANTHER SYNTAXIN 41 288 IPR045242 -
Bisa05g1457 304 SMART tSNARE_6 198 265 IPR000727 -
Bisa05g1457 304 FunFam Syntaxin 132 196 296 - -
Bisa05g1457 304 Gene3D - 194 296 - -
Bisa05g1457 304 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bisa05g1457 304 Pfam SNARE domain 241 290 IPR000727 -
Bisa05g1457 304 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Bisa05g1457 304 MobiDBLite consensus disorder prediction 1 28 - -
Bisa05g1457 304 MobiDBLite consensus disorder prediction 103 126 - -
Bisa05g1457 304 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1457 Bisa-ChrBisa05 26072371 26073285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1457 1 302 SNARE and Associated Proteins AT1G61290 69.205 2.07e-159 444