Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1447 ATGGTTTTGTCCAGTACGCTGAGGAGGGTTTTTCGCCGTGCCCACAAGGAGAAAGGGCTTCCAGGCGGCGATTTGGACCTCGAACGTGTAATTCCCGTTCATTTCCGGTGTCCGGTGAGTCTTGAGCTCATGAAAGATCCGGTGACTTTGTCTACCGGGATCACCTACGACAGGGAAAGCATCGAGAGGTGGATCGAATCGGGAAATGTTACTTGTCCGGTGACGAATCAAGTTCTGGCTGGCACTCACATGATCCCTAACCACGCCATTCGGAGGATGATTCAAGACTGGTGCGTCGAGCATCGGTCCTACGGAATCGAGAGGATCCCGACGCCGAGAATCCCCGTGGCGCCGTACGAGGTTTCCGAGACTTGTTCCAGGATCGTCGCCGCGACGCGTAATGGCGACGAGAAGAAGTGCGAGGAATTGGTGGGGAAGATCAGGAATTGGGGGAGAGAGAGCGAGAGGAACAAGAGGTGTATAGTGGAGAATGGGGCTTGTTCTGTGCTAGCCTCTGCCTTTGATTCTTTCTCAATTAGGTCGATTGAGGAAAATGTGGGTGTTCTACAGGAGATCTTAGGGGTGCTTCCATGGATGATGAATCCGCAACAGGAAGAAGCAAGAGTAAAATTGGGGTCTAAATCATCTTTAAACTGCTTGATTTGGTTCCTAAATGGGAAAGATCTCTCTGCGAGACAAAATGCAGCTATGGTGCTCAAGGAAATGCCTGTGAGAGCTCTGGCAAAAACTGAAGGCGTAGTTGAAGCTTTAGTGACGATGATCAGAGAGCCTATTGGACCAAACGCAACCAAGGCAAGCTTGACAAAGATCTTCCACTTGGTTTCCTCATCAGATGACAGAGAGAGAATCACAATCATACAGAGATTTGTGGAACTGGGTTTGGTTTCTTTATTACTGGACACTATTGTTGATGCAGAGAGAAGCATATGTGAGAAGGCTTTAGGTGTGTTGGATTGTCTCTGTGATTGTAAAGAAGGGAAGGAAATGGCCATGGCTAATGCTCTGACCTTGCCTCTTGCAATCAAGAAGATTCTGAGGGTATCAGAATTAGCTACAGAGTTTTCAGTCTCCATTCTCTTGAAGCTCTTTGAGAAGGAAGATGAGAGGATTCTGATTGAAGCAGTTCAAGTGGGGGCTTTTCAGAAGCTTCTGGTTATATTGCAGGTGGGTTGTGGAGAGAGCATGAAAGAGAAGGTCACTGAGTTGTTGAAACTGTTGAATGCTTATAGAAGCAGAGTAGAGTGTGTTGATTCATCCTTGGACTTCAAGTACCTTAAGAAGCCCTTCTGA 1311 0.4752 MVLSSTLRRVFRRAHKEKGLPGGDLDLERVIPVHFRCPVSLELMKDPVTLSTGITYDRESIERWIESGNVTCPVTNQVLAGTHMIPNHAIRRMIQDWCVEHRSYGIERIPTPRIPVAPYEVSETCSRIVAATRNGDEKKCEELVGKIRNWGRESERNKRCIVENGACSVLASAFDSFSIRSIEENVGVLQEILGVLPWMMNPQQEEARVKLGSKSSLNCLIWFLNGKDLSARQNAAMVLKEMPVRALAKTEGVVEALVTMIREPIGPNATKASLTKIFHLVSSSDDRERITIIQRFVELGLVSLLLDTIVDAERSICEKALGVLDCLCDCKEGKEMAMANALTLPLAIKKILRVSELATEFSVSILLKLFEKEDERILIEAVQVGAFQKLLVILQVGCGESMKEKVTELLKLLNAYRSRVECVDSSLDFKYLKKPF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1447 436 CDD RING-Ubox_PUB 32 79 IPR045210 -
Bisa05g1447 436 SUPERFAMILY ARM repeat 124 413 IPR016024 -
Bisa05g1447 436 PANTHER WDSAM1 PROTEIN 28 419 IPR045185 GO:0061630
Bisa05g1447 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 104 IPR013083 -
Bisa05g1447 436 Gene3D - 120 416 IPR011989 -
Bisa05g1447 436 SMART Ubox_2 34 97 IPR003613 GO:0004842|GO:0016567
Bisa05g1447 436 FunFam RING-type E3 ubiquitin transferase 31 102 - -
Bisa05g1447 436 Pfam U-box domain 31 102 IPR003613 GO:0004842|GO:0016567
Bisa05g1447 436 SUPERFAMILY RING/U-box 29 107 - -
Bisa05g1447 436 ProSiteProfiles U-box domain profile. 30 104 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1447 Bisa-ChrBisa05 25965629 25966939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1447 21 436 U-box Gene Family AT5G37490 48.463 2.28e-126 371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1447 05 25965629 25966939 Bisa05g1447 05 25965629 25966939 CCT
Bisa05g1447 05 25965629 25966939 Bisa05g1447 05 25965629 25966939 ECH