Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1440 ATGCCCTTGCAAGGAATTTTCATAGAACCACCCCAAGCTTCTTCATCAACCTCAACCTCCCCTCCTCCCGATCTCTCCCTCCACATAAGCCTTCCTTCTCCTTCTTCTTCTTCTGCAACTCACACTCGCACTGACCTCTCTCTCGGTCGAAATTTCAATTTCACCCCTCCTCCGCCGCCGCCAACACCGCCACCCCACCATAACAACAATAACCCTTGTTTTCATAACACTAACATAAATAACAACATCGGAGGAGTTTCATTCCTTGATGTGTCTCCTTCTTCTTCTTCATCGTCATCGTCATCATTATCGGAGGGCTTGAGGCCGATCAAAGGGATTCCGGTGTATCCCAACCGTTCATTCCCTTTCTTGCCCAACCACCATCACCACCAGACCAAGATGTGCTTCTACCACCCCTCTCTCTCCTCTCCTTCTCCCTCTTCTTCTTCTCCCTACTTGGGGGCTTTGGATCCCGTGTCGGCGGCGTATAGGGCAGGGACAAATACTGCTGTCAGGTTCGATGGCATCTCCGGCGACGCCTTCAAATCTCATCATCATCAGCAGTTGCACCATCATCATCAGTATGGGGTGGGGGTTGGGCCTGGGCCTTCCTCTCACGAGCCCATGAGATCCAGATTCTTGCCTAAGTTTCCCACCAAGAGAAGCATGAGAGCCCCCAGAATGAGATGGACCACCACCCTCCATGCCCGATTCGTTCACGCCGTCGAGCTCCTCGGCGGCCATGAAAGAGCGACACCGAAGTCAGTACTGGAGCTGATGGATGTGAAGGATCTCACATTGGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACGACTGACAAGCCTGCGGCTTCTTCGGGCCATTCAGATGGGTCTGGAGATGATGACATGTTTGCAGATCAAAGAGGCAGAGCAGATCGGTCGGTGCAGCAAGATATGGACTACAATTCTACTACCTCTACTCTATGGAGTAATTCTTCTAGTAGTAGAGAGGCATGGCCACAAAATGGTACCAAAGACAGTGATGCTCTCAGAGCCGCCACCTTCCACTCACAACCGGTATCAGCAGGGCGTCAAATAATTCAGGAGTGTGATGACTCAAGGCAAACGAAGAAGAACTTGTCAGGCTCTATTTTGGAGTGCAAGAACCCAAGCTTGGAGTTCACATTAGGAAGACCAGATTGGAATGGCACAGGACAAGCTTAA 1218 0.5049 MPLQGIFIEPPQASSSTSTSPPPDLSLHISLPSPSSSSATHTRTDLSLGRNFNFTPPPPPPTPPPHHNNNNPCFHNTNINNNIGGVSFLDVSPSSSSSSSSSLSEGLRPIKGIPVYPNRSFPFLPNHHHHQTKMCFYHPSLSSPSPSSSSPYLGALDPVSAAYRAGTNTAVRFDGISGDAFKSHHHQQLHHHHQYGVGVGPGPSSHEPMRSRFLPKFPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGDDDMFADQRGRADRSVQQDMDYNSTTSTLWSNSSSSREAWPQNGTKDSDALRAATFHSQPVSAGRQIIQECDDSRQTKKNLSGSILECKNPSLEFTLGRPDWNGTGQA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1440 405 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 23 401 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bisa05g1440 405 NCBIfam myb-like DNA-binding domain, SHAQKYF class 226 279 IPR006447 GO:0003677
Bisa05g1440 405 Gene3D - 225 282 - -
Bisa05g1440 405 MobiDBLite consensus disorder prediction 189 210 - -
Bisa05g1440 405 MobiDBLite consensus disorder prediction 53 68 - -
Bisa05g1440 405 Pfam Myb-like DNA-binding domain 227 278 IPR001005 -
Bisa05g1440 405 SUPERFAMILY Homeodomain-like 223 279 IPR009057 -
Bisa05g1440 405 MobiDBLite consensus disorder prediction 9 51 - -
Bisa05g1440 405 MobiDBLite consensus disorder prediction 297 313 - -
Bisa05g1440 405 MobiDBLite consensus disorder prediction 1 77 - -
Bisa05g1440 405 FunFam Myb family transcription factor 224 282 - -
Bisa05g1440 405 MobiDBLite consensus disorder prediction 314 340 - -
Bisa05g1440 405 MobiDBLite consensus disorder prediction 281 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1440 Bisa-ChrBisa05 25836532 25843623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1440 1 399 G2-like Transcription Factor Family AT5G16560 42.377 9.58e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa05g1440 Myb_DNA-binding 2e-05 CL0123