Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1431 ATGGTTCTCTCTAAAATCTCCTCCCAGACCGACGTCTCCGTCCACTCTACCTTCGCTTCTCGCTATGTACGCGCTTCGCTTCCCAGGTTCAGGATGCCGGAGGAGTCGATACCGAAGGAGGCGGCGTATCAGATCATCAACGACGAGCTGATGCTCGACGGCAATCCCAGGCTGAATCTCGCCTCCTTCGTGACGACCTGGATGGAGCCTGAGTGTGACAAGCTCATCATGTCCTCCATCAACAAGAACTACGTCGACATGGAAGAGTACCCTGTCACCACCGAACTCCAGAATCGGTGCGTGAACATGATAGCTCATCTGTTCAATGCACCCCTGGGAGACTCAGAGGCTGCAGTCGGAGTCGGCACGGTTGGGTCATCAGAGGCCATAATGTTGGCTGGATTGGCTTTCAAAAGAAAGTGGCAGAACAAAAGGAAAGCTGAGGGAAAGCCTTATGACAAGCCCAACATCGTCACCGGTGCCAACGTTCAGGTTTGCTGGGAGAAATTTGCAAGATACTTCGAAGTGGAGCTGAAAGAGGTGAAACTGAGGGAAGGATATTACGTAATGGACCCCGAAAAAGCTGTGGAAATGGTGGACGAGAACACCATCTGCGTCGCTGCAATCCTCGGCTCCACTCTAAATGGAGAGTTCGAAGATGTGAAGAGCTTGAATGACCTCCTCGTCCAAAAGAACAAAGAAACAGGATGGGATACGCCAATTCATGTGGATGCAGCGAGTGGTGGGTTCATAGCACCATTCATATACACAGACCTTGAGTGGGACTTCAGGTTACCACTGGTGAAGAGCATCAACGTGAGTGGTCACAAGTACGGTTTGGTCTACGCCGGCATCGGGTGGGTCATCTGGAGAAGCAAAGGGGACTTGCCGGAGGAGCTAATCTTCCACATCAACTATCTCGGCTCCGACCAACCCACGTTCACCCTCAACTTTTCCAAGGGTTCGAGCCAAGTGATCGCCCAGTACTACCAGCTCATTCGCCTGGGCAACGAGGGGTACAGGAACGTCATGGAGAATTGCAGAGACAACATGCTGGTGCTCAAGGAAGGACTCGAGAAAACGGGAAGGTTCACAATCGTGTCCAAAGACGACGGCGTTCCGTTGGTGGCCTTCACGCTGAAGGACAACTCGCACTTCAACGAGTGCCAGGTGTCGGATTTGTTGAGGCGGTTTGGGTGGATAGTGCCAGCGTACACCATGCCTCCTGATGCGCAGCACGTGACTGTGCTACGTGTCGTCATCAGAGAGGACTTCTCCAGGACACTCGCGGAGCGCCTCGTGCTTGACATAGAGAAGGTTCTGCATGAGCTGGACTCGCTGCCTCCCAGGGCCGGCGCCGTTGTGAGTAACACCACTGTGACGGTTGCTGAGGAACACGTGGCAGTGGCACAACCTAATGGCAACAATATTAATGGTACTGTGGTTGTTGCCAAGAAGAGTGCTTTGGAGACTCAAAGGGAGATCACTGACGCTTGGAAGAAGTTCGTCATGCAGAGGAAGAAGAACGATGAGAACATGAGCGGTGTTTGCTTGACCTAG 1560 0.5282 MVLSKISSQTDVSVHSTFASRYVRASLPRFRMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMEEYPVTTELQNRCVNMIAHLFNAPLGDSEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKSLNDLLVQKNKETGWDTPIHVDAASGGFIAPFIYTDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKGDLPEELIFHINYLGSDQPTFTLNFSKGSSQVIAQYYQLIRLGNEGYRNVMENCRDNMLVLKEGLEKTGRFTIVSKDDGVPLVAFTLKDNSHFNECQVSDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDIEKVLHELDSLPPRAGAVVSNTTVTVAEEHVAVAQPNGNNINGTVVVAKKSALETQREITDAWKKFVMQRKKNDENMSGVCLT 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1431 519 FunFam Glutamate decarboxylase 1 65 - -
Bisa05g1431 519 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bisa05g1431 519 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Bisa05g1431 519 Gene3D - 1 65 - -
Bisa05g1431 519 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bisa05g1431 519 Gene3D - 361 448 - -
Bisa05g1431 519 Gene3D - 66 360 IPR015421 GO:0003824
Bisa05g1431 519 FunFam Glutamate decarboxylase 66 360 - -
Bisa05g1431 519 FunFam Glutamate decarboxylase 361 448 - -
Bisa05g1431 519 PANTHER GLUTAMATE DECARBOXYLASE 1 507 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1431 Bisa-ChrBisa05 25614924 25618491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1431 1 517 Calmodulin-binding Proteins AT5G17330 81.625 0.0 875