Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1427 ATGGAGTTTTGGCGAGAGAAGGAAACCGGTGTTTGTGAATTGTTTATTGTCTTCTCATTTGGGGACTTGTACAAGGTTGCTATGACGATTCAAGATCAAAATGGAGTTACTAGATCGCACAGTGGTCTTCCAGTAGGAAATGGAGTATCCTTGAGTTCTGGACTACATTCTGTTACACGTTCTCAACGAAATGATCAGTTTTCTTGTGGGAATGACTACGCTCCGAAGGTAAGGAAACCATATACTATCACAAAACAGAGAGAGAGATGGACAGATGAAGAGCACAAGAAGTTCCTTGAAGCTTTAAAGCTGTATGGCCGGGCTTGGCGACGGATCGAAGAACATGTTGGCACAAAGACTGCAGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCGAAGGTTCTTCGTGACCCTAGTGGGAACAATATTGGATCGATGGAGTCCATTGAAATTCCACCTCCACGACCAAAACGAAAGCCGATGCATCCTTACCCTCGTAAGCAGGTAGAGCCTAGCAAAGAAATTTCCAAACCCGAACAGCCAATGAGGTCTAATTCTCTGAAGTCATCGGATTTTGATCAAGAAAACCAATCTCCCAAATCTGTGTTATCAGCACTTGGTTCAGACACCCTAGGTTCTTCTGATTCAGACACACCAAATGGAAGCTCATCCCCAATTTCATCCAATAGCGATGTTCATACCAGTAACTTCGTAGCTGCTGAACCCAAAACCCTACTACTATCCGAGGAAGATGGGTGTCCACCACGAGCCGTACTAAATGCTGATTCAGCTCTTGACGAGCAATCACCTACGAAATTTGAACTTTATCCGAAAGGAAATGTTTCTGCCAAAGAAGATGCAGCAGAAGAATCATCTGCTCGAACTCTGAAGCTCTTTGGGACTACTCTGTTAGTAACAGATACCTGTAGGCCATCATCTCCAACAATGGAATCATGCAAGTTGATGCACTCAAACTTACTGCCAATGAATTCTCCTGAGTCCAATGTCGAACGTGGACAGATTAATATGCCCAATGGAGTACAAGGTGGTGTGTATATCATGCAGCTTCAGAGTGGAAATTTAGAACTTGCAGAAGGTGGTCCTGTTACATTTGTTCCTTGGTTGAGTCTTCCCCACATTAGACCACTCATGCCACTGCACATAGAGGATCCTAACGGGAAGCATCTAGACTCTAATCTAGGGGACGTTGAAGATAAAGAAGTTCAAAAGGAAGGATCCATGACTAACTCAAACACTAGCAGTACATCTGTAAATAATGAGGAGAATGAAGAAAAACCATATATCCGAGCCAAAAATGATACATTAGCTATGTTTGATCTAGGGGGGAGAATAAAAAACTGTGGAAAAGGGTTTGTGCCATATAAAAGGTGCATTGCAGAGAGAGAGAACGAGTCCTCACCATCAATAACAAGGGAGGAGAGGGAAGAGCAACGAATCCGCCTTTCCTTATAA 1476 0.4316 MEFWREKETGVCELFIVFSFGDLYKVAMTIQDQNGVTRSHSGLPVGNGVSLSSGLHSVTRSQRNDQFSCGNDYAPKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVLRDPSGNNIGSMESIEIPPPRPKRKPMHPYPRKQVEPSKEISKPEQPMRSNSLKSSDFDQENQSPKSVLSALGSDTLGSSDSDTPNGSSSPISSNSDVHTSNFVAAEPKTLLLSEEDGCPPRAVLNADSALDEQSPTKFELYPKGNVSAKEDAAEESSARTLKLFGTTLLVTDTCRPSSPTMESCKLMHSNLLPMNSPESNVERGQINMPNGVQGGVYIMQLQSGNLELAEGGPVTFVPWLSLPHIRPLMPLHIEDPNGKHLDSNLGDVEDKEVQKEGSMTNSNTSSTSVNNEENEEKPYIRAKNDTLAMFDLGGRIKNCGKGFVPYKRCIAERENESSPSITREEREEQRIRLSL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1427 491 Pfam Myb-like DNA-binding domain 87 130 IPR001005 -
Bisa05g1427 491 NCBIfam myb-like DNA-binding domain, SHAQKYF class 85 134 IPR006447 GO:0003677
Bisa05g1427 491 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Bisa05g1427 491 MobiDBLite consensus disorder prediction 406 434 - -
Bisa05g1427 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Bisa05g1427 491 FunFam protein REVEILLE 6 isoform X1 89 137 - -
Bisa05g1427 491 MobiDBLite consensus disorder prediction 413 429 - -
Bisa05g1427 491 PANTHER SWI/SNF COMPLEX-RELATED 56 420 - -
Bisa05g1427 491 MobiDBLite consensus disorder prediction 179 234 - -
Bisa05g1427 491 ProSiteProfiles SANT domain profile. 85 136 IPR017884 -
Bisa05g1427 491 MobiDBLite consensus disorder prediction 470 491 - -
Bisa05g1427 491 MobiDBLite consensus disorder prediction 153 178 - -
Bisa05g1427 491 MobiDBLite consensus disorder prediction 136 234 - -
Bisa05g1427 491 Coils Coil 482 491 - -
Bisa05g1427 491 CDD SANT 89 132 IPR001005 -
Bisa05g1427 491 Gene3D - 89 135 - -
Bisa05g1427 491 SMART sant 86 134 IPR001005 -
Bisa05g1427 491 SUPERFAMILY Homeodomain-like 81 134 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1427 Bisa-ChrBisa05 25509575 25512583 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa05g1427 Myb_DNA-binding 1.2e-13 CL0123