Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1426 ATGGAAATGTCACTTGCGCTGCTCAGCACACTCACAATTCTATTCATTCTCTCTCCAACAGCCACCTCTCATTACTCTTACTCCTCTTCCTCTCCACCTTCTTCATCTTCTTCTCTGCAATCTTCATCTTCCTCCTCCCTCTCCGAATGGCGATCTGCACACGCTACTTACTACGCCGCCGCAGATCCCAGGGACGCAGTGGGCGGCGCGTGTGGCTACGGAGACCTCGTTAAAGCGGGTTACGGCATGGCCACTGTGGGTCTCAGTGAGACACTTTTCGAGCATGGCCAGATCTGCGGTGCCTGCTTCGAGCTTCGCTGTGTCGAGGACCTCCGCTGGTGTATCCCCGGAACCTCCATTATCGTCACCGCCACGAACTTCTGTGCGCCGAACTATGGTTTCACCGCCGAGGGAGGTGGCCACTGTAACCCTCCCAACAAGCATTTCGTGCTCCCAATTGAAGCATTCGAGAAGATCGCTATTTGGAAAGCTGGGAACATGCCAGTCCAGTATCGGAGGATAAAGTGCAGAAAGGAAGGAGGAATTCGATTTACAGTCACTGGTTCCGGTATCTATATTTCAGTGCTGATCAGCAATGTAGGTGGCCGTGGAGACATTGTTGCGGTGAAAATTAAGGGCTCAAGAACAGGTTGGCTTCCAATGGGTCGGAACTGGGGCCAAAACTGGCATGTAAACGCATTACTACAGAATCAACCTCTTTCTTTTGAGGTCACTGGTAGTGATGGGATAACAGTGACATCTTACAATGTTGCTCCCAAGGATTGGAGCTTCGGACAAACTTTTGAAGGCAAGCAATTCGAGTCTTAA 828 0.5097 MEMSLALLSTLTILFILSPTATSHYSYSSSSPPSSSSSLQSSSSSSLSEWRSAHATYYAAADPRDAVGGACGYGDLVKAGYGMATVGLSETLFEHGQICGACFELRCVEDLRWCIPGTSIIVTATNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRFTVTGSGIYISVLISNVGGRGDIVAVKIKGSRTGWLPMGRNWGQNWHVNALLQNQPLSFEVTGSDGITVTSYNVAPKDWSFGQTFEGKQFES 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1426 275 PRINTS Expansin/Lol pI family signature 89 107 IPR007118 GO:0005576
Bisa05g1426 275 PRINTS Expansin/Lol pI family signature 256 270 IPR007118 GO:0005576
Bisa05g1426 275 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Bisa05g1426 275 PRINTS Expansin/Lol pI family signature 218 232 IPR007118 GO:0005576
Bisa05g1426 275 PRINTS Expansin/Lol pI family signature 164 180 IPR007118 GO:0005576
Bisa05g1426 275 PRINTS Expansin/Lol pI family signature 49 64 IPR007118 GO:0005576
Bisa05g1426 275 SUPERFAMILY PHL pollen allergen 178 270 IPR036749 -
Bisa05g1426 275 PRINTS Expansin signature 107 118 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 180 192 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 227 248 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 139 156 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 156 169 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 192 213 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 80 94 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 120 130 IPR002963 GO:0009664
Bisa05g1426 275 PRINTS Expansin signature 256 272 IPR002963 GO:0009664
Bisa05g1426 275 SUPERFAMILY Barwin-like endoglucanases 45 199 IPR036908 -
Bisa05g1426 275 Gene3D - 181 273 IPR036749 -
Bisa05g1426 275 Pfam Lytic transglycolase 86 171 IPR009009 -
Bisa05g1426 275 Pfam Expansin C-terminal domain 182 259 IPR007117 -
Bisa05g1426 275 CDD DPBB_EXPA_N 49 176 - -
Bisa05g1426 275 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 191 270 IPR007117 -
Bisa05g1426 275 PANTHER EXPANSIN-A15 20 273 IPR002963 GO:0009664
Bisa05g1426 275 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 68 181 IPR007112 -
Bisa05g1426 275 SMART dpbb_1 85 171 IPR007112 -
Bisa05g1426 275 Gene3D - 33 177 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1426 Bisa-ChrBisa05 25489515 25492507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1426 49 275 Expansin Gene Family AT3G03220 85.463 1.69e-150 419