Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1396 ATGAGGGCGCAGGTTAGCAACGGTACGCACTTCGCCACGGCGCAGGCAGGCAGAGGAGGAGCCAGTCCGGTGTACGCGCTATTTCAATGCAGAAACTTCCTCTCCATCGCCGATTGCCTCGCTTGCCTCTCAGTCGCCGCCACCCACATCCGCAACGTCTCCGCCGGAAACGACGGCGCCCGCGTCATCTACGACGGCTGCTTTCTCAGGTACGAGGGCAGCCCCTTCTACTACGAGGGCACGGAGCCTGGGAATGGCATTCAATGTGGGAATCAGAGTGCTCAAGATTCCGCAGCGTTCACCGCAGCTGGGCAGCAACTGTTGACGAATCTCCAAATCGCAGTCCCCAGAATCACTGGTTTCTTCGCAGCCACCAAGACGCAAGTCACCAATGGTCCCTCCATTTACGCCTTCGCTCAATGCGTTGACACCGTCACAGAGGATACCTGCCTCACTTGCTTGTCCGTCGGGAATAGCAATTTGCAGAGATGTCTTCCCAATTCCAATGGTAGGGCCTACGATGCTGGGTGTTTCATAAGATACTCTTCCACATCCTTCTTTGCCGATAACCAGACCGTTGATATCACGCCCTTCTTGAAACAAGGAGTTTCAAGCAAGAAGTGGGCTATTATTGGCGGAGTTGTGGGAGGTGTAGCATTTGTTTTGATCCTCTTTGCATTATTTGTCTGGCTTAGACGGTCAAAGAGGCCCAAGAGGGCTCCTAGAGGCGACATATTGGGGGCAACCGAATTGAAAGGCCCAGCAATCTACAGGTATACAGATTTAAAGGTTGCAACAAAAAATTTCAGTGAAGAAAATAAACTAGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAGAATGGGAAAGTAGTTGCAGTTAAGAAATTAGCTTTAGGCCACTCCAAGAGGATGGAGGAAGATTTTGAAAGTGAAGTCAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGCACTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGAAAAATAGCAGTCTTGACAAATTCTTATTCGGTGAAAAGAGAGGCTCTCTCAACTGGAAACAACGGTGTGATATGATTTTAGGCACGGCAAGGGGTCTAGCCTATCTGCATGAGGAATTCCACGTTTGCATAATACACAGAGATATAAAGACCAACAATATCCTCTTGGATGATGATTTTCAGCCCAGAATTGCTGATTTTGGGTTGGCAAGGCTTCTTCCTGGGGACCAATCTCATCTTAGCACGAAATTTGCAGGAACATTGGGATACACTGCACCTGAGTATGCAATTCATGGGCAGCTATCAGAGAAGGCTGACACCTACAGCTATGGTGTTGTAGTCCTAGAAATCATAAGTGGCCACAAGAGCAGTAAATTGATGGTTGACGATGAAGGCGAATTTCTCCTTCAACGAGCTTGGAAACTTTACGAGAGAGGCATGCACTTAGAGTTGGTGGACGATACCTTAGACCCCAATGACTATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTCTGCACCCAAGCAACTGCTGCAACAAGGCCGACGATGTCCGAAGTAGTTCTTTTGCTCAAAAGCAAGGGCTTATTAGAGAACATACGCCCGACTATGCCTGTGTTCGTTGATACTCATTTGAGGTCCAGGGGAGATACCTCTACCTCTACTGGTTCATCTACATCCAAAGCTACTGCTTCCATTTCTACACAATCAGGAAGATGA 1767 0.4748 MRAQVSNGTHFATAQAGRGGASPVYALFQCRNFLSIADCLACLSVAATHIRNVSAGNDGARVIYDGCFLRYEGSPFYYEGTEPGNGIQCGNQSAQDSAAFTAAGQQLLTNLQIAVPRITGFFAATKTQVTNGPSIYAFAQCVDTVTEDTCLTCLSVGNSNLQRCLPNSNGRAYDAGCFIRYSSTSFFADNQTVDITPFLKQGVSSKKWAIIGGVVGGVAFVLILFALFVWLRRSKRPKRAPRGDILGATELKGPAIYRYTDLKVATKNFSEENKLGEGGFGDVYKGTLKNGKVVAVKKLALGHSKRMEEDFESEVKLISNVHHRNLVRLLGCCTKGQERILVYEYMKNSSLDKFLFGEKRGSLNWKQRCDMILGTARGLAYLHEEFHVCIIHRDIKTNNILLDDDFQPRIADFGLARLLPGDQSHLSTKFAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEIISGHKSSKLMVDDEGEFLLQRAWKLYERGMHLELVDDTLDPNDYDAEEVKKIIEIGLLCTQATAATRPTMSEVVLLLKSKGLLENIRPTMPVFVDTHLRSRGDTSTSTGSSTSKATASISTQSGR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1396 588 FunFam Cysteine-rich receptor-like protein kinase 2 346 548 - -
Bisa05g1396 588 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 25 575 - -
Bisa05g1396 588 MobiDBLite consensus disorder prediction 562 588 - -
Bisa05g1396 588 FunFam Cysteine-rich receptor-like protein kinase 2 233 345 - -
Bisa05g1396 588 ProSiteProfiles Gnk2-homologous domain profile. 82 186 IPR002902 -
Bisa05g1396 588 SMART serkin_6 269 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1396 588 Pfam Protein tyrosine and serine/threonine kinase 272 538 IPR001245 GO:0004672|GO:0006468
Bisa05g1396 588 Gene3D - 86 186 IPR038408 -
Bisa05g1396 588 Gene3D - 1 76 IPR038408 -
Bisa05g1396 588 ProSiteProfiles Protein kinase domain profile. 269 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1396 588 ProSitePatterns Protein kinases ATP-binding region signature. 275 298 IPR017441 GO:0005524
Bisa05g1396 588 MobiDBLite consensus disorder prediction 560 588 - -
Bisa05g1396 588 Gene3D Phosphorylase Kinase; domain 1 246 345 - -
Bisa05g1396 588 FunFam Cysteine-rich receptor-like protein kinase 2 84 186 - -
Bisa05g1396 588 Gene3D Transferase(Phosphotransferase) domain 1 346 549 - -
Bisa05g1396 588 SUPERFAMILY Protein kinase-like (PK-like) 252 540 IPR011009 -
Bisa05g1396 588 Pfam Salt stress response/antifungal 89 183 IPR002902 -
Bisa05g1396 588 Pfam Salt stress response/antifungal 10 72 IPR002902 -
Bisa05g1396 588 ProSiteProfiles Gnk2-homologous domain profile. 1 76 IPR002902 -
Bisa05g1396 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Bisa05g1396 588 CDD STKc_IRAK 275 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1396 Bisa-ChrBisa05 24615203 24620950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1396 11 588 Receptor kinase-like Gene Family AT1G70520 39.492 3.13e-122 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa05g1396 PK_Tyr_Ser-Thr 1.5e-50 CL0016