Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1394 ATGAGTCCTCTCTTCTTCTTCTTGCTAACCTTCATACTTTTTTCATGGTGGACCTTTCACGGCGTCGTTTCGGATCCACAAACCCATTTCTTAGTTAGCGGACGCAGCCAGTACAACGCCACCAACTTGTCGGCCTTCAACAACAACCTAAATGCAACGTTTCGAGACCTGAGGGCGAAGGTTAACAACGGTACGCACTTCGCCACGGCCCAGGAAGGTAGAGGAGGAGCCAGTCCGGTGTATGCGCTATTTCAATGCAGAAACTACCTCTCCGTCGCGGACTGCCTCGCTTGCTTCTCTGTCGCCGCAGCCCAGATCCGCATAGTCTCCGCCGGAAATGAGGGCGCCCGCATCATCTACAACGGCTGCTTCCTCAGGTACGAGGGCAGCCCCTTCTACAACGAGGGCACGGAGCCTGGGAATGGCATTCAATGTGGGAATCAGAGTGCTCAAGATTCCGCAGCGTTCACCTTAGCTGGGCAGCAACTGTTGACAAATCTCCAAATCGCAGTCCCCAGAATCCCTGGTTTCTTCGCAGCCACCAAGACGCAAGTCCCCAATGGTCCCTCCATTTATGCCTTTGCTCAATGCGTCGAAACCGTCACAGAGGATGCTTGCCTCGCCTGCTTGTCCGTCGGAAACACTAATTTGTATAGATGTCTTCCCAATTCAAATGGTAGTGCCTACGATGCTGGGTGTTTCATGAGATACTCTAATGCGTCCTTCTTTGCTAATAACAGGACCGTTGATATCACGCCATTTTTGAAACAAGGAGCTTCAAGTAAGAAGTGGGCCATTATTGGCGGAGTTGTGGGAGGTGTAGCTCTTGTTTTAATCCTCCTTGCATTATTTGTTAGGCTTAGACGATCTAAGAGGCCCAAGAGGGCTCCTAGAGGGCACTGTTCACCCAAAATGCCCTGTGCCTTTCTCTTATTTCATGAATTTTATGCTCCTATTGTATCATTTCTTTGTTTGTATGTTCGAGTATCAGTAGATGAATCCGTGACTGGGATAAAGAGATTTTCATTTGCGTTTTACTCGACAGGTGACATATTGGGGGCAACCGAATTGAAAGGCCCAGTAAGCTATAGGTATAAAGATTTGAAGGCTGCAACAAAAAATTTCAGCGAAGAAAACAAGCTAGGAGAAGGAGGTTTTGGTGAAGTCTACAAGGGTACTCTAAAGAATGGGAAAGAAGTTGCAGTCAAGAAATTAGCTTTAGGCCACTCCAAGAGGATGGACGAAGATTTTGAAAGTGAAGTCAAGCTTATAAGTAACGTTCATCATCGCAATCTTGTTCGGCTTCTGGGATGTTGCATTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGAAAAACAGCAGTCTTGACAGATTCTTATTTGGTGCAAACAGAGGTTCTCTCAACTGGAAGCAACGGTATGATATAATTTTAGGTACAGCAAGGGGTCTAGCCTATCTGCATGAGGAATTCCACGTTTGCATCATACACAGAGATATAAAGACCAGCAATATCCTCTTGGATGATGATTTTCAGCCCAAAATTGCAGATTTTGGGTTAGCAAGGCTTTTACCTGGGGACCAATCTCATCTTAGTACAAACTTTGCAGGAACATTGGGATACACCGCACCTGAATATGCAATTCATGGGCAGCTAACAGAGAAGGCTGACACTTACAGCTATGGTGTTGTAGTCCTAGAAATCATAAGTGGCCGAAAGAGCAGTGAATTGAAGGTTGATGATGATGGCGAATTCCTCCTTCAACGAGCTTGGAAGCTTTATGAAAGGGGCATGCACTTAGAGTTGGTGCACAGTACCATAGACCCCAACGATTATGATGCAGAAGAAGTGAAGAAAACCATAGAGATTGCTTTGCTTTGCACCCAAGCGACTGCTGCAACAAGGCCAACGATGTCTGAAGTAGTTGTTCTGCTCAAAAGCAAGGGCTTATTGGAGCACATACGACCAACTATGCCTGTGTTGGTTGAAACTAATTTGAGGTCCAGGGGAGATACCTCTACCTCTACTGGTTCATCTACATCCAATGCTACTGCCTCCACTTCTATACTGTCAGCAAGATGA 2085 0.4609 MSPLFFFLLTFILFSWWTFHGVVSDPQTHFLVSGRSQYNATNLSAFNNNLNATFRDLRAKVNNGTHFATAQEGRGGASPVYALFQCRNYLSVADCLACFSVAAAQIRIVSAGNEGARIIYNGCFLRYEGSPFYNEGTEPGNGIQCGNQSAQDSAAFTLAGQQLLTNLQIAVPRIPGFFAATKTQVPNGPSIYAFAQCVETVTEDACLACLSVGNTNLYRCLPNSNGSAYDAGCFMRYSNASFFANNRTVDITPFLKQGASSKKWAIIGGVVGGVALVLILLALFVRLRRSKRPKRAPRGHCSPKMPCAFLLFHEFYAPIVSFLCLYVRVSVDESVTGIKRFSFAFYSTGDILGATELKGPVSYRYKDLKAATKNFSEENKLGEGGFGEVYKGTLKNGKEVAVKKLALGHSKRMDEDFESEVKLISNVHHRNLVRLLGCCIKGQERILVYEYMKNSSLDRFLFGANRGSLNWKQRYDIILGTARGLAYLHEEFHVCIIHRDIKTSNILLDDDFQPKIADFGLARLLPGDQSHLSTNFAGTLGYTAPEYAIHGQLTEKADTYSYGVVVLEIISGRKSSELKVDDDGEFLLQRAWKLYERGMHLELVHSTIDPNDYDAEEVKKTIEIALLCTQATAATRPTMSEVVVLLKSKGLLEHIRPTMPVLVETNLRSRGDTSTSTGSSTSNATASTSILSAR 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1394 694 FunFam Cysteine-rich receptor-like protein kinase 2 452 654 - -
Bisa05g1394 694 ProSiteProfiles Protein kinase domain profile. 375 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1394 694 MobiDBLite consensus disorder prediction 667 694 - -
Bisa05g1394 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Bisa05g1394 694 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Bisa05g1394 694 MobiDBLite consensus disorder prediction 666 694 - -
Bisa05g1394 694 FunFam Cysteine-rich receptor-like protein kinase 2 346 451 - -
Bisa05g1394 694 Pfam Protein tyrosine and serine/threonine kinase 378 644 IPR001245 GO:0004672|GO:0006468
Bisa05g1394 694 Pfam Salt stress response/antifungal 145 239 IPR002902 -
Bisa05g1394 694 Pfam Salt stress response/antifungal 39 128 IPR002902 -
Bisa05g1394 694 FunFam Cysteine-rich receptor-like protein kinase 2 140 242 - -
Bisa05g1394 694 Gene3D - 142 242 IPR038408 -
Bisa05g1394 694 Gene3D - 27 132 IPR038408 -
Bisa05g1394 694 SUPERFAMILY Protein kinase-like (PK-like) 358 646 IPR011009 -
Bisa05g1394 694 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Bisa05g1394 694 Gene3D Phosphorylase Kinase; domain 1 352 451 - -
Bisa05g1394 694 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
Bisa05g1394 694 CDD STKc_IRAK 381 647 - -
Bisa05g1394 694 Gene3D Transferase(Phosphotransferase) domain 1 452 654 - -
Bisa05g1394 694 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 81 682 - -
Bisa05g1394 694 SMART serkin_6 375 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1394 Bisa-ChrBisa05 24549421 24556791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1394 45 667 Receptor kinase-like Gene Family AT4G28670 34.700 3.85e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa05g1394 PK_Tyr_Ser-Thr 1.4e-50 CL0016