Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1393 ATGGAGATGGAGAATCTTCAGAAGCTATGGCAGTTTGAGATGTACAATAATTCTTTCATCGAGAAGCTTCCCATTAGGCTGAGAAACCTTTCGGCATTAGAGTTGGATGATGTCACCGCCTCTTTAGCTTTGGTTTCGTCAATCTTAGGACCGTTCTGTGACTGCAACTCTGTCTCTGCCTCAAACCGTGATGAAGCCCGTGGGAAGTATGAGAGCAGCCCCTTCTACTACCAGGGCACGGAGACTGGGAACGCCAATCTATGTGGGAATCAGAGTGCTCAAGATTCCGCAGCTTTCACCGCAGCTGGGCAGCAATTGTTGACGAATCTCCAAATCGCAGTCCCCAGAATCCCTGGTTTCTTCGCAGCCACCAAGACGCAAGTCCCCAATGGTCCCTCCATTTACGCCTTCGCTCAATGCGTCGAAACCGTCACAGAGGATGCTTGCCTCGCCTGCTTGTCCGTCGGGAATAGCAATTTGCAGAGATGTCTTCCCAATTCCAATGGTAGGGCCTACGATGCTGGGTGTTTCATGAGATACTCTTCCACATCCTTCTTTGCCGATAACCAGACCGTTGATATCACTCCCTTTTTGAAACAAGGAGGTTCAAGCAAGAAGGGGGCCATTATTGGCGGAGTTGTGGGAGGTGTAGCTCTTCTTTTGATCCTTCTTGCATTATATGTCAGGCTTAGACGGTCAAAGAGGCCCAAGAGGGCTCCTAGAGGTGACATATTGGGGGCAACCGAATTGAGAGGCCCAGTAAACTATAGGCATAAAGATTTGAAGGCAGCAACAAAAAATTTCAGCGAAGAAAACAAGCTAGGAGAAGGAGGTTTTGGTGATGTCTACAAGGGTACTCTAAAGAATGGGAAAGAAGTTGCAGTCAAGAAATTAGCTTTAGGCCACTCCAAGAGGATGGACGAAGATTTTGAAAGTGAAGTCAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGGCTTCTGGGATGTTGCATTAAAGGCGAAGACAGAATCCTTGTTTATGAATGCATGAAAAACAGCAGTCTTGACAGATTCTTATTTGGTGAAAAGAGAGGTTCTCTCAACTGGAAGCAACGGTATGATATAATTTTAGGCACAGCAAGAGGTCTAGCCTATCTGCATGAGGAATTCCATGTTTGTATCATACACAGAGATATAAAGTCCAGCAATATCCTCTTGGATGATGATTTTCAGCCCAGAATTGCTGATTTTGGGTTGGCAAGGCTTTTACCTGGGGACCAATCTCATCTTAGTACGAAATTTGCAGGAACATTGGGATACACTGCACCTGAGTATGCAATTCATGGGCAGCTATCAGAGAAGGCCGACACTTACAGCTATGGTGTTGTAGTCCTGGAAATCATAAGCGGCCGAAAGAGCAGTGAATTGAAGGTTAATGATGATGGCGAATTCCTCCTTCAACGAGCTTGGAAGCTTTATGAGAGGGGCATGCACTTAGAGTTAGTGGACAATACCATAGACCCCAACGATTATGATGCAGAAGAAGTGAAGAAAATCTTGGAGATTGGTTTACTTTGCACCCAAGCAACTGCTGCAACAAGGCCAACGATGTCTGAAGTAGTTGTTCTGCTCAAAAGCAAGGGCTTATTGGAGCATATACGACCAACTATGCCTGTGTTGGTTGAAACTAATTTGAGGTCCAAGGGAGATACCTCTACCTCTACTGGTTCATCTACATCCAATGCTACTGCCTCCACTTCTATACTATCAGCAAGATGA 1764 0.4546 MEMENLQKLWQFEMYNNSFIEKLPIRLRNLSALELDDVTASLALVSSILGPFCDCNSVSASNRDEARGKYESSPFYYQGTETGNANLCGNQSAQDSAAFTAAGQQLLTNLQIAVPRIPGFFAATKTQVPNGPSIYAFAQCVETVTEDACLACLSVGNSNLQRCLPNSNGRAYDAGCFMRYSSTSFFADNQTVDITPFLKQGGSSKKGAIIGGVVGGVALLLILLALYVRLRRSKRPKRAPRGDILGATELRGPVNYRHKDLKAATKNFSEENKLGEGGFGDVYKGTLKNGKEVAVKKLALGHSKRMDEDFESEVKLISNVHHRNLVRLLGCCIKGEDRILVYECMKNSSLDRFLFGEKRGSLNWKQRYDIILGTARGLAYLHEEFHVCIIHRDIKSSNILLDDDFQPRIADFGLARLLPGDQSHLSTKFAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEIISGRKSSELKVNDDGEFLLQRAWKLYERGMHLELVDNTIDPNDYDAEEVKKILEIGLLCTQATAATRPTMSEVVVLLKSKGLLEHIRPTMPVLVETNLRSKGDTSTSTGSSTSNATASTSILSAR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1393 587 CDD STKc_IRAK 274 540 - -
Bisa05g1393 587 Pfam Protein kinase domain 269 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1393 587 FunFam Cysteine-rich receptor-like protein kinase 2 345 547 - -
Bisa05g1393 587 ProSiteProfiles Protein kinase domain profile. 268 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1393 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Bisa05g1393 587 ProSitePatterns Protein kinases ATP-binding region signature. 274 297 IPR017441 GO:0005524
Bisa05g1393 587 Gene3D Phosphorylase Kinase; domain 1 243 343 - -
Bisa05g1393 587 Gene3D Transferase(Phosphotransferase) domain 1 345 547 - -
Bisa05g1393 587 Pfam Salt stress response/antifungal 88 182 IPR002902 -
Bisa05g1393 587 FunFam Cysteine-rich receptor-like protein kinase 2 83 185 - -
Bisa05g1393 587 SUPERFAMILY Protein kinase-like (PK-like) 251 539 IPR011009 -
Bisa05g1393 587 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 96 575 - -
Bisa05g1393 587 Gene3D - 81 185 IPR038408 -
Bisa05g1393 587 MobiDBLite consensus disorder prediction 559 587 - -
Bisa05g1393 587 MobiDBLite consensus disorder prediction 560 587 - -
Bisa05g1393 587 SMART serkin_6 268 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1393 587 ProSiteProfiles Gnk2-homologous domain profile. 81 185 IPR002902 -
Bisa05g1393 587 FunFam Cysteine-rich receptor-like protein kinase 2 232 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1393 Bisa-ChrBisa05 24519576 24524505 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1393 71 587 Receptor kinase-like Gene Family AT1G70520 38.941 1.74e-109 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa05g1393 Pkinase 8.5e-49 CL0016