Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1369 ATGGTGTTGAGATGTTTACTTGAAACTCTGCCACTTATGATAACAGATTGCATGTCTTGCTTGGTTTGGTTGTATTCTAGTATGAGTAGACCAACCACACGAAGTAAAAATAAAAGACAAAGACAAGTAGATGATGGTGCCAGCACTACTGAAATATGGAGGAAAATTCACGAAACAGGTGTGGTAACTGATGATGATATGAATCAACTGTATATGATTTGGAAGCCAGTTTGCTCAGGCTGCCGTGTCAATACCAAAGACAACCCTAATTGCTTCTGTGCATTGGTTCCACCTCCTAATGGAACCCGAAAGTCTGGTTTATGGCAGAAGATGTCAGGTATTGTTGACAATCTTGGCCCTGACCCAACCAAGGACCTTCGTGCTTCTACTAATACACCTGCTGGTCTGACAAATCTTGGGGCTACATGTTATGCCAACAGTATACTCCAGTGCTTGTACATGAATAAATCTTTTCGGGAAGGCATATTTTCTGTAGAACCAGATGTTTTGCAACAACAGCCAGTGTTAAATCAACTAGCTCGGCTTTTTGTGCAGTTGCACATTAGTAAAATGGCTATTGTAGATTCATTTCCATTTGTAAAAACGTTGGAGTTAGATAATGGAGTTCAGCAGGACAGCCATGAGTTTCTGACATTGCTTCTATCATTGCTTGAGCGGTGTCTGAGACATTCTGAAGTACCCAAGGCAAGAACAGTAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTAACCACCTGCTCACAATGTGGACGAGACTCCGAAGCATCTTCTAAAATGGAAGACTTCTATGAGCTGGAGTTAAATGTCAAAGGTTTGAAAAGTTTAGATGAGAGCCTGGATGATTACCTCACTGTTGAAGAGCTTCATGGAGATAATCAATATTTTTGCGAGTCATGTAAAGCAAGAGTTGATGCTACTCGTAGCATCAAGCTGCGTACATTACCCGACGTACTTAATTTTCAACTTAAACGTTGTGTCTTCCTTCCAGAGACTACAACGAGGAAGAAAATTACTTCTGCATTTTCATTTCCTGCTAACCTTGACATGCGACATAGATTGTCTGAGCCATCTCAATCTGAATTGATTTATGACTTGTCAGCTGTATTAATTCACAAGGGAACTACTGTTAATAGTGGCCATTATGTTGCTCACATCAAGGATGACAATACTGGGCAATGGTGGGAATTTGATGATGAGCATGTCACCAAATTAGGTTGTCATCCATTTGGTGACAAATCTTCAAATTCTACTGCAAAATCTGTTAGGACTGATCCCATTCTTTCTGATTGCCCTGAAGCAAGGATAGCTGATAGTAATGGAAATGGTTTAGATGCCATTCACTCACAATCTTCTCTCGTGGAGACATTTTCATCTAGTGATGCATACATGTTGATGTACAATCTCAAGCATACTAAAAATGTTGGCAAAACCGGGGATATGGTCAGTGGTGCTAACCACAAGGAAAGAGATGGTGATGTAGTTTCTGCACAAAATGGTTTTCCACTTTTATCTCATCTTTTTTATGAGATTCAGAATTTCAATGCATCATATCTTGAGGAGTGTGAGCAGTACAATCGTAGGAAAGAGTTAGAATTGGGTCATATCAATGAAAGGAGACAGGAAGTTCGATCAGTTTTAGCTGAAGCTCCTGTTCAACCACTTGAACAACCATTCTATTGGATTTCTTGTGACTGGCTTCGCCAGTGGGCTGACAACATTAATCCAATCACCCTTGACAACACATCCATTCAATGCTCACATGGGAAAGTTCCAGTATCGAAGGTTACTTCAATGAAGCGCTTATCTGATAAAGCATGGGATAAGTTGTTATCTAAGTATGGTGGGGGACCTACACTGTCCCATGGTGACTGTTGTTGGGAGTGCCTTATTGATGGGGCTCGCACTGTAGTGTCAGCTGACACCTATCGGGATCGAAGAGAATCAATGAAGCAACTTGCACGGGACATTCTTGATGGAAACTGTCCAGATGGAAAATATTACATATCTAGAGCATGGTTGCAACAGTGGTGGAAAAGAAAAGTAGTTGATGCTCCATCTGAAGCTGATGCTGGACCAACGGCATCAATTAGTTGCCCACATGGGCAAATTATGCCTGAGCAAGCTGCTGGTGCTAAGCGGGTGCTTGTTCCTGAGAGCTTTTGGCTCTTCTTATATGAAGATGCTGTTTCTGTGAAACCCGATGATCCTTTGGGTTGCCTTACTTTTCCTTTAGACTCCGTAGAGTGCTCTCAATGCAGTAATGAATTATCTGAAGTAGCATGCTTGGAGGACTCTTTAAGATTAGTGAAACAAAGGCAACGTCAGAATCATGAGAAACTGTTACTGGCTAAAAGTATGCCACTCTCTCTGCATTGCAAGTATTTCTTAGTGCCTTCTTCATGGATTTCAAAATGGAGAAGCTACATGAGTTCATCTGTCAAGAATTCGGACAAACCTGAAACTTTAGATGGGATAATTAATTCCATGATGTGTGAAAAGCACTCACGGCTTGTTGAAAGGCCACCTGAACTGGTATTCAGACGCGGTGCTATAATGCAAAGAGATTCTTCTGCAGGTGGCTTAACAATCATATCGGAGAATGACTGGAAATGCTTTTGTGAAGAATGGGATGGTACTGAGACAAGAGGTATTTCTGCAACAATTGAGAATATCAGTGATTCAGAGAATATTTTGACTGAAACCTGTACAGAGACACCAATATGTGAGGATCAGTTGAGTGATAAAGTGAATAATGATAGTGGGACTGGACAAATTGTGATTAAGACTTGTCCGGAGATCTGTGAAAGTTGTATTGGAGAGAGAAAAAGCTGCGAGTTAATGCAGAAACTTAACTATTGCAATGAGAACATATGTGTAATCCTTGTACGAGGGAAGGAAGTACCTAGATCAATATTGGAGGCTTCAAAGGGCTCTGTTGAAACTGATCGGCGAGTATCCAAGCGCTCCCGGAAGTCTAAAAATGGGACGTCTGTTAGTCTCAATGTTTCTGCTTCGACGTCATTGTACCAGCTAAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACAGAAAGGTGAGAGGACAATTGATATTGATAATGAATGTGCTACGCTTGCGGATGTAAACATATTTGCTGGAGATCAGATTATAGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGATATGTGATGAGAAAATGGAGATGCACCATACTGAGGGAGGGTTTCGTGGAACACTTCTGACAGCCGACGTTTCATCTCAGGTTGTTTGA 3327 0.4124 MVLRCLLETLPLMITDCMSCLVWLYSSMSRPTTRSKNKRQRQVDDGASTTEIWRKIHETGVVTDDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALVPPPNGTRKSGLWQKMSGIVDNLGPDPTKDLRASTNTPAGLTNLGATCYANSILQCLYMNKSFREGIFSVEPDVLQQQPVLNQLARLFVQLHISKMAIVDSFPFVKTLELDNGVQQDSHEFLTLLLSLLERCLRHSEVPKARTVVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLTVEELHGDNQYFCESCKARVDATRSIKLRTLPDVLNFQLKRCVFLPETTTRKKITSAFSFPANLDMRHRLSEPSQSELIYDLSAVLIHKGTTVNSGHYVAHIKDDNTGQWWEFDDEHVTKLGCHPFGDKSSNSTAKSVRTDPILSDCPEARIADSNGNGLDAIHSQSSLVETFSSSDAYMLMYNLKHTKNVGKTGDMVSGANHKERDGDVVSAQNGFPLLSHLFYEIQNFNASYLEECEQYNRRKELELGHINERRQEVRSVLAEAPVQPLEQPFYWISCDWLRQWADNINPITLDNTSIQCSHGKVPVSKVTSMKRLSDKAWDKLLSKYGGGPTLSHGDCCWECLIDGARTVVSADTYRDRRESMKQLARDILDGNCPDGKYYISRAWLQQWWKRKVVDAPSEADAGPTASISCPHGQIMPEQAAGAKRVLVPESFWLFLYEDAVSVKPDDPLGCLTFPLDSVECSQCSNELSEVACLEDSLRLVKQRQRQNHEKLLLAKSMPLSLHCKYFLVPSSWISKWRSYMSSSVKNSDKPETLDGIINSMMCEKHSRLVERPPELVFRRGAIMQRDSSAGGLTIISENDWKCFCEEWDGTETRGISATIENISDSENILTETCTETPICEDQLSDKVNNDSGTGQIVIKTCPEICESCIGERKSCELMQKLNYCNENICVILVRGKEVPRSILEASKGSVETDRRVSKRSRKSKNGTSVSLNVSASTSLYQLKMMIWESFGVVKENQILQKGERTIDIDNECATLADVNIFAGDQIIVRDSEIHENRDIADEICDEKMEMHHTEGGFRGTLLTADVSSQVV 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1369 1108 SUPERFAMILY Cysteine proteinases 131 478 IPR038765 -
Bisa05g1369 1108 ProSiteProfiles DUSP domain profile. 541 633 IPR006615 GO:0004843
Bisa05g1369 1108 FunFam Ubiquitin carboxyl-terminal hydrolase 26 532 630 - -
Bisa05g1369 1108 Gene3D - 773 892 IPR035927 -
Bisa05g1369 1108 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 135 150 IPR018200 GO:0004843|GO:0006511
Bisa05g1369 1108 FunFam ubiquitin carboxyl-terminal hydrolase 48 121 477 - -
Bisa05g1369 1108 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 371 389 IPR018200 GO:0004843|GO:0006511
Bisa05g1369 1108 CDD Peptidase_C19L 135 474 IPR033841 GO:0004843
Bisa05g1369 1108 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 90 477 - -
Bisa05g1369 1108 CDD Ubl_USP48 998 1099 IPR044743 GO:0004197|GO:0004843|GO:0016579
Bisa05g1369 1108 Pfam Ubiquitin carboxyl-terminal hydrolase 135 474 IPR001394 GO:0004843|GO:0016579
Bisa05g1369 1108 SUPERFAMILY Ubiquitin-like 1001 1067 IPR029071 -
Bisa05g1369 1108 Gene3D - 997 1068 - -
Bisa05g1369 1108 SMART dusp 559 630 IPR006615 GO:0004843
Bisa05g1369 1108 ProSiteProfiles DUSP domain profile. 776 896 IPR006615 GO:0004843
Bisa05g1369 1108 ProSiteProfiles DUSP domain profile. 648 750 IPR006615 GO:0004843
Bisa05g1369 1108 SUPERFAMILY DUSP-like 545 629 IPR035927 -
Bisa05g1369 1108 Gene3D Cysteine proteinases 120 477 - -
Bisa05g1369 1108 Gene3D - 533 630 IPR035927 -
Bisa05g1369 1108 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 134 477 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1369 Bisa-ChrBisa05 24206991 24217871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1369 132 409 Miscellaneous Gene Families AT4G31670 29.667 4.06e-26 113