Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1343 ATGGCGGTGGAACTCATGGGGTTTCCAAAGATGGACGACCAGAAGGCAATTCAAGAGGCGGCATCGGAGGGTTTAAAGGGAATGGAGAATCTCGTCCGTCTTCTCTCCCATCAACCCAATCTCTCAGACTGCACTGACCTCACCGGCGTCACCGTTTCTAAGTTCAAAAAACTCATCTCTCTTCTTAACCGCACCGGACACGCCCGATTCAGGCGAGCGCCGATTCCCTCCTCTTCCTCCTTTTCTCCTTCAACTTCTACATCACCGCCGCCATCATCCGCCGCGCCCTCCTCCTTCAACATTTCCCAATCGCAAATTACTAATCTACCTGCGGCACAGTTCACATCTCCCTCGCCGATTTCAAATTCCGTCACCGTGCATCACTCTCCGATGAACAACACCACTTCTCCTCCCTCCGGGTTCGTTCCGGTCCAGTCACAGTCTCTGACTCTCGATTTCACGAAGCCTAACTTCTTGAGTACCAAAACAAAGTCCCTAGAGCTGGAGTTCTCGAAGGAGACCTTCAGCGTGTCCTCGAATTCATCGTTCATGTCGTCGGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAACAAGGATCGTCGATCTTCCTCAATCCGGCTGCACCGACGGTCTCCGGCAGCGGGAAGCCACCGTTCTCAATGGCGCCGACGAAGAAGAGGTGCCACGACCACCGCGAGCACTCGGACGACCTCTCCGGCAAAGTCTCCGGCTCCAATAAGTGCCACTGCGTAAAGAGAAGGAAAAATCGTGTGAAGAAGACGGTGAGAGTGCCGGCGATTAGCTCGAAGATCGCGGACATCCCGCCGGACGAGTACTCGTGGAGGAAGTACGGCCAGAAGCCAATCAAGGGTTCGCCTTACCCTCGGGGGTACTATAAGTGCAGCACAGTGAGAGGGTGTCCAGCAAGGAAACACGTGGAGCGGGCCCCAGATGATCCGACGATGCTGATCGTGACGTACGAGGGGGAGCACCGTCACGCGCTGCAGGAGAACGTAGCCGCGAGTGCGAGTGCGAGTGCGAGTGCGGGTTTGGTATTCCAGTCAACGTAA 1074 0.5605 MAVELMGFPKMDDQKAIQEAASEGLKGMENLVRLLSHQPNLSDCTDLTGVTVSKFKKLISLLNRTGHARFRRAPIPSSSSFSPSTSTSPPPSSAAPSSFNISQSQITNLPAAQFTSPSPISNSVTVHHSPMNNTTSPPSGFVPVQSQSLTLDFTKPNFLSTKTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLNPAAPTVSGSGKPPFSMAPTKKRCHDHREHSDDLSGKVSGSNKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPTMLIVTYEGEHRHALQENVAASASASASAGLVFQST 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1343 357 Pfam Plant zinc cluster domain 226 274 IPR018872 -
Bisa05g1343 357 MobiDBLite consensus disorder prediction 112 140 - -
Bisa05g1343 357 MobiDBLite consensus disorder prediction 209 247 - -
Bisa05g1343 357 FunFam WRKY transcription factor 65 260 337 - -
Bisa05g1343 357 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g1343 357 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 344 IPR044810 GO:0003700
Bisa05g1343 357 MobiDBLite consensus disorder prediction 75 99 - -
Bisa05g1343 357 ProSiteProfiles WRKY domain profile. 271 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g1343 357 Gene3D WRKY domain 263 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g1343 357 SUPERFAMILY WRKY DNA-binding domain 274 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g1343 357 MobiDBLite consensus disorder prediction 72 99 - -
Bisa05g1343 357 SMART WRKY_cls 276 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g1343 357 MobiDBLite consensus disorder prediction 224 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1343 Bisa-ChrBisa05 23706727 23708603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1343 1 356 WRKY Transcription Factor Family AT2G24570 58.424 1.91e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa05g1343 WRKY 1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1343 05 23706727 23708603 Bisa05g1343 05 23706727 23708603 ECH