Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1326 ATGGCTTCCCCAGAAGGCTGTTGTTATTGGATTCTCATCCTCTTCTTCACTCTAATCATTTGTTCTGTGCCATCACTGGGTGATGATGTACAAGTTCTGATGAAGTTCAAGAGCTTTTTGGCCAATGCTGGTGCCTTAAACAACTGGGGGTCTGACTCTACCAGTCTGTGTGACTGGGACGGTGTATTATGCCGCAACAGCACATTTCATGGTTTGAAACTTGAGAACATGGGACTAAGTGGCACTATAGACATAGATACCTTGGTGGAATTGTCTAATTTGCAAAGTTTTAGCGTCATTAACAACAGCTTCGAGGGTTCAATGCCTATATTCAACAAGATTGGGAGGTTAAAAGGATTGTTTTTGTCCAATAACAAGTTCTCTGAAGGAATTCCAGATAATGCTTTTGACGGTATGAAATACCTGAAGAGGGTGTTCTTGGCAGAAAATGAATTTACAGGTCCCATTCCAAAGTCCCTCGCTGAATTGCCTAACCTTCTGGATTTGGACTTACATGGGAATCGTTTCCAAGGCCAAATACCAGAGTTTCGAAAGCATAATTTCAGAGTGTTTAATTTATCGAACAACCAGTTGGAGGGTCCAATACCAGAAAGCTTGAACGTCACCGATCCCAGCTCATATGCTGGCAACAACCTATGTGGAAAAACTTTAAACCGCTGCAGTGATTCCTCCTCCAAAAAGAGCAACATCCTTTTAATCGCTATTATAGTGGTGGCTGTGATTGCCTTGGCTTCAATAATAGCAATTCTATTTGTCCTTCGCCGCAGAAGACGACGTTCTCAGAACAAACCGAGCCAGGAAGTGGAATCCCAGTCCCAGAGCCAGAACAGTGCAGGCTTGATGACGAGGGAGACTCAATCAATTGATCTGTCAGTTGATATCAAGAAGGGAGAAAATGGAGATTTGAACTTCGTTAAGAAAGACAGAGAGAGATTTGATCTGCAAGACCTTCTTAAAGCCTCAGCTGAAGTTCTGGGTGGTGGTAGCTTTGGATCTACATATAAGGCTATTGTTTTGAATGGGCCAGCTGTGGTAGTGAAGAGATTTAGGCACATGAACAATCTTGGAAAAGAAGAGTTCTTTGAGCACATGAGAAGGCTTGGAAGTTTGTCCCATCCCAATCTGCTCCCTCTTGTTGCATTCTACTACAGAAAAGAAGAGAAGCTTCTGGTTTATGACTTTGTTGAAAATGGCAGCTTAGCTAGTTATCTCCATGGTAGGCGTGGTTCTGGGCTAAACTGGCCAACTCGGTTGAGAATCATAAAAGGAGTGGCCAGGGGATTGGTTTACCTCTACAGAGAATTCCCAGAGCAAAACCTACCTCACGGCCATCTCAAATCCTCCAACGTCCTCCTAGACCAGTCAATGGAGCCCCGTTTAGCAGAATACGGACTCGTCCCAGTGATGAACAAAAGCCACGCGCAACAATTCATGGCGGCATACAAATCCCCAGAGGCGAGCCAATCCGACGGACCCACCGAGAAGACCGACGTGTGGTGTCTAGGGATTCTCATCCTCGAGCTTCTGACGGGGAAATTTCCGGCAAATTACCTGCGACACGGAAAGGGCGCAAACTCTGATCTGGCAACGTGGGTGAATTCGGTGGTGAAGGAGGAGTGGACGGGCGAAGTGTTCGATAAGGATATGTCGGGGACGAGGAACAGAGAGGGAGAGATGCTGAAGCTGTTGAAGATAGGGATGTACTGCTGCGAATGGAGCGAGGAGAATCGGTGGGATTGGAAGGAAGCGGTGGCGAAGATCGAGGAATTGAAGGAGAAGGAAAGTGAAGATGAATTCTCTTCATTCAACAGTGAAGGGGATTTCAACTCCAGGCCTATGACTGAAGAGGATTTCTCGCTCTCAGTCACTAGTGAGAAGTAA 1902 0.4585 MASPEGCCYWILILFFTLIICSVPSLGDDVQVLMKFKSFLANAGALNNWGSDSTSLCDWDGVLCRNSTFHGLKLENMGLSGTIDIDTLVELSNLQSFSVINNSFEGSMPIFNKIGRLKGLFLSNNKFSEGIPDNAFDGMKYLKRVFLAENEFTGPIPKSLAELPNLLDLDLHGNRFQGQIPEFRKHNFRVFNLSNNQLEGPIPESLNVTDPSSYAGNNLCGKTLNRCSDSSSKKSNILLIAIIVVAVIALASIIAILFVLRRRRRRSQNKPSQEVESQSQSQNSAGLMTRETQSIDLSVDIKKGENGDLNFVKKDRERFDLQDLLKASAEVLGGGSFGSTYKAIVLNGPAVVVKRFRHMNNLGKEEFFEHMRRLGSLSHPNLLPLVAFYYRKEEKLLVYDFVENGSLASYLHGRRGSGLNWPTRLRIIKGVARGLVYLYREFPEQNLPHGHLKSSNVLLDQSMEPRLAEYGLVPVMNKSHAQQFMAAYKSPEASQSDGPTEKTDVWCLGILILELLTGKFPANYLRHGKGANSDLATWVNSVVKEEWTGEVFDKDMSGTRNREGEMLKLLKIGMYCCEWSEENRWDWKEAVAKIEELKEKESEDEFSSFNSEGDFNSRPMTEEDFSLSVTSEK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1326 633 Gene3D Ribonuclease Inhibitor 28 132 IPR032675 -
Bisa05g1326 633 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1326 633 Gene3D Transferase(Phosphotransferase) domain 1 402 617 - -
Bisa05g1326 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 602 IPR046959 -
Bisa05g1326 633 SUPERFAMILY Protein kinase-like (PK-like) 330 597 IPR011009 -
Bisa05g1326 633 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Bisa05g1326 633 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Bisa05g1326 633 MobiDBLite consensus disorder prediction 268 289 - -
Bisa05g1326 633 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Bisa05g1326 633 FunFam Pollen receptor-like kinase 1 402 608 - -
Bisa05g1326 633 Pfam Protein kinase domain 330 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1326 633 MobiDBLite consensus disorder prediction 609 633 - -
Bisa05g1326 633 MobiDBLite consensus disorder prediction 598 633 - -
Bisa05g1326 633 Gene3D Ribonuclease Inhibitor 133 242 IPR032675 -
Bisa05g1326 633 SUPERFAMILY L domain-like 35 206 - -
Bisa05g1326 633 FunFam pollen receptor-like kinase 1 296 401 - -
Bisa05g1326 633 MobiDBLite consensus disorder prediction 272 289 - -
Bisa05g1326 633 Gene3D Phosphorylase Kinase; domain 1 292 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1326 Bisa-ChrBisa05 23357474 23360353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1326 13 627 Receptor kinase-like Gene Family AT4G31250 46.316 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa05g1326 Pkinase 2.2e-29 CL0016