Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1311 ATGCAATCTGCTCACCAATCACTGCCTTTTGACTCTTTATCCCTCAAGTCAGAGTTTCTTCTCCAGGTGAAATCAGATCATCTGGACCAACATCATTATAAAGCATCGAAACCCCATTTGAACAAGAGTTTTCACTCCATGCAAAAGGAGAAGGAAGCGATCGGGAGGGATAAGGAAATGGAAGGGACGAAAGAGGAAAGCCTACCACCTGGGTTTAGGTTTCATCCCACAGACGAAGAACTCATCAATTGCTATCTCATCCACAAGATCTCCGATTCTTCTTTTACTGGCAGAGCAATCACTGATGTCGATCTCAACAAATGCGAGCCTTGGGACCTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGCCTAAGAGACAGGAAATACCCGACAGGAGTGAGAACCAACAGAGCGACGAACTCAGGATATTGGAAGACCACAGGCAAAGACAAAGAAATCCTCAACACTGTTACATCGGAGTTGGTTGGGATGAAGAAGACTTTGGTATTCTACAAAGGCAGAGCCCCCAGAGGAGAGAAAAGTAACTGGGTCATGCACGAATATCGCATTCACTCCAAATCCTCCTTCAGACCTAATCACAAGGATGAATGGGTGGTTTGCAGAGTGTTCCAGAAGAGTTGTGGTCCAAAGAAGTACCCTTCAAACCACACAAGAGTAAACCCTTACGCCCTAGAAATAGTTAAATCTGGAAGCAAAGGCAAAGAAAGTGATATTAGAGGAGGCATGGGAGAATCGGTAAGAAGGCAATTGACAATCACGGTGATGGACTGGGAGGGTCAAATTAAGGAGTTCAAGCACCCAATCTCAGCGAGCTCCGTTGTCTCCAACTACCCTAATTACTTCCTTTATGACTCTAAATCTGTCTACTTCGGCATGTGCGTGACTCGCGTTCCCGACCACGAGAAACTTCGGCCTGGCCAGATCTACTTCCTCCTCCCTCTCTCTTTCTCCAATCAACCCTTATCCCTCCGTACTCTCTACGATCTTGCCATTAAAGTCAACACTGCTCTTCTTCATTAG 1056 0.4621 MQSAHQSLPFDSLSLKSEFLLQVKSDHLDQHHYKASKPHLNKSFHSMQKEKEAIGRDKEMEGTKEESLPPGFRFHPTDEELINCYLIHKISDSSFTGRAITDVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNSGYWKTTGKDKEILNTVTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSFRPNHKDEWVVCRVFQKSCGPKKYPSNHTRVNPYALEIVKSGSKGKESDIRGGMGESVRRQLTITVMDWEGQIKEFKHPISASSVVSNYPNYFLYDSKSVYFGMCVTRVPDHEKLRPGQIYFLLPLSFSNQPLSLRTLYDLAIKVNTALLH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1311 351 Pfam PADRE domain 261 342 IPR025322 -
Bisa05g1311 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 65 237 - -
Bisa05g1311 351 FunFam NAC domain-containing protein 100-like 77 220 - -
Bisa05g1311 351 Gene3D NAC domain 77 220 IPR036093 GO:0003677|GO:0006355
Bisa05g1311 351 Pfam No apical meristem (NAM) protein 69 195 IPR003441 GO:0003677|GO:0006355
Bisa05g1311 351 SUPERFAMILY NAC domain 60 217 IPR036093 GO:0003677|GO:0006355
Bisa05g1311 351 ProSiteProfiles NAC domain profile. 68 217 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1311 Bisa-ChrBisa05 23095310 23106716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1311 57 224 NAC Transcription Factor Family AT2G24430 76.786 9.54e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa05g1311 NAM 2.8e-40 No_clan