Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1271 ATGGAGAGGATCATCGGAGGGAAGTATAAGCTGGGTCGGAAGATAGGGAGCGGGTCGTTCGGCGAAATCTATATTGCTGCCCACATCGAGACTTCTGAGATTGTGGCCATCAAGATGGAGAGCAAGAAGACTAAACATCCACAACTACTGTATGAGGCCAAGTTGTATAATATTCTTCAAGGAGGAAGTGGTATTCCTGGTGTGAAATGGTGTGGTATTGATGGAGACAATAATGCTCTAGTCATTGATCTTCTGGGACCAAGCCTTGAGGATCTTTTTGTATACTGCGGCAGGAAGTTTTCACAGAAAACAGTTTTGATGTTGGCTGCCCAGATGCTCACGAGGATAGAGTATTTGCATTCTAAGGGATTTTTGCATAGAGATATAAAACCAGACAACTTCCTTATGGGTCTAGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTTGCAAAAAGATACAAGGATCCTACCACAAATAAGCATATTGCTTACAGAGAGAACAAAAATTTAACAGGCACTGCACGGTATGCAAGTTGCAACACTCATTTAGGAATTGAGCAAAGTAGACGGGATGATCTGGAGTCCCTTGGCTATGTTCTTTTGTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGCCAATAAAAAGCAAAAATATGACAAGATTTGTGAGAAGAAGTTATCCACATCCATTGAGGTCCTCTGCAAGTCTTATCCTGTGGAATTTGCTTCTTACTTCCATTATTGCCACTCTTTGACATTTGATCAACGCCCAGATTATGGATTCTTGAAGCGCTTGTTTCTTGATTTATTTACTCGTGAAGGATATGAATGTGACTACGTATTTGACTGGACCCTGCTTAAATATCAGCAGTCTCAACAGAAAAAAATGAAGGATCAATTAAATCATGCTGCTGATGTGCCTAGCAGTCTAGAGCCAACTGTTATAGATAAGCATAGAGGAGTCAATGGTTCTACTCAAATTGCTGAGGCAAGACCAATAACAAATGTTGATGCACGTGTTAGTAAGCAGATAAGGTCATCACATGATCCGAATCTGAATGCTGAGAATCAGATTGAGAAACTTAATGTGAAAAATGGTCTATCTTCATCATCAGCGAAGCCCAGATGCGCAGAAGAGGTCCCAAAAGCAGAGAAGTCAATAAGAACCTCAAACCAGGGCCGTGTATTTGGGCATAACGCTGGTGCTTCAAGCAGCTGGGTTCCTTCACTACGCCGAATTTCTTCAGCCAAGAAATAG 1278 0.4163 MERIIGGKYKLGRKIGSGSFGEIYIAAHIETSEIVAIKMESKKTKHPQLLYEAKLYNILQGGSGIPGVKWCGIDGDNNALVIDLLGPSLEDLFVYCGRKFSQKTVLMLAAQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVYMIDFGLAKRYKDPTTNKHIAYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAANKKQKYDKICEKKLSTSIEVLCKSYPVEFASYFHYCHSLTFDQRPDYGFLKRLFLDLFTREGYECDYVFDWTLLKYQQSQQKKMKDQLNHAADVPSSLEPTVIDKHRGVNGSTQIAEARPITNVDARVSKQIRSSHDPNLNAENQIEKLNVKNGLSSSSAKPRCAEEVPKAEKSIRTSNQGRVFGHNAGASSSWVPSLRRISSAKK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1271 425 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Bisa05g1271 425 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1271 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bisa05g1271 425 ProSiteProfiles Protein kinase domain profile. 9 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1271 425 PANTHER CASEIN KINASE-RELATED 8 372 - -
Bisa05g1271 425 MobiDBLite consensus disorder prediction 393 425 - -
Bisa05g1271 425 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bisa05g1271 425 MobiDBLite consensus disorder prediction 370 425 - -
Bisa05g1271 425 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Bisa05g1271 425 FunFam Casein kinase I isoform delta-like 1 339 - -
Bisa05g1271 425 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1271 Bisa-ChrBisa05 22273277 22281007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1271 9 238 EF-hand Containing Proteins AT4G23650 27.966 6.26e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bisa05g1271 Pkinase 8.3e-29 CL0016