Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1269 ATGAATGTTAGTAATGTGAATTCAGTGGAGAGTATTTGCATAATTGATGAATCTGATGTGTCAATGAAGTTGATTTCTGGTATTCATACTGCTTCCAATGGAATAGGACAAGCGAAGACTCGTGCTACACCCTACACACAGCACACACACCACACCCATTGCCTCTCTCTATTGCTGCCTATAGCCTTAATCAGAGTTCGAAGCGAGGCAACAATGGCCAAAATCGCTCTCGGTACCACCAGAGAGGCCACCCAACCCGACTGCCTTCAGGCCCTCGTCGTCGAGTTCATCACCACCTTCCTTTTCGTCTTCGCCGGTGTTGGTTCCGCCATGGCCGTCGATAAGCTAGGTGCGGATGCAATGGTCGGGTTGTTTGCGGTGGCCGTGGCGCATGCCCTTGTGGTGGCCACCATGATCTCCGCCGGCCACATCTCCGGCGGCCACCTCAACCCCGCCGTCACGCTCGGCCTCCTCGTTGGCGGCCACATTACCCTCTTCCGTTCCATCCTTTACTGGATCGATCAGTTACTCGCATCTGTAGCTGCTTGTTATCTTCTCCACTACCTCTCAGGGGGACTGACAACTCCAGTTCATACTCTTGCAAGCGGAGTGGGGTATACTCAGGGAGTGATATGGGAGATTATCCTGACGTTCTCGTTGCTGTTCTCCGTATACGCTACTATGGTGGATCCCAAGAAGGGGGCCCTTGATGGGCTGGGCCCAACACTGGTTGGATTCGTAGTGGGGGCCAACATTCTGGCTGGTGGGGCCTTTTCCGCTTGTTCCATGAACCCGGCAAGATCATTTGGGCCTGCTTTGGTCAGTGGAAACTGGACAGACCACTGGGTTTACTGGGTCGGCCCACTCATTGGCGGTGGGCTAGCCGGCTTCATGTACGAGACCTTCTTCATCGAAGGCAGATCTCATGTTCCACTCCCTCGAGATGAAGAAAGCTACTAG 960 0.5365 MNVSNVNSVESICIIDESDVSMKLISGIHTASNGIGQAKTRATPYTQHTHHTHCLSLLLPIALIRVRSEATMAKIALGTTREATQPDCLQALVVEFITTFLFVFAGVGSAMAVDKLGADAMVGLFAVAVAHALVVATMISAGHISGGHLNPAVTLGLLVGGHITLFRSILYWIDQLLASVAACYLLHYLSGGLTTPVHTLASGVGYTQGVIWEIILTFSLLFSVYATMVDPKKGALDGLGPTLVGFVVGANILAGGAFSACSMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFMYETFFIEGRSHVPLPRDEESY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1269 319 SUPERFAMILY Aquaporin-like 82 315 IPR023271 -
Bisa05g1269 319 CDD MIP 90 302 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 Gene3D Glycerol uptake facilitator protein. 72 316 IPR023271 -
Bisa05g1269 319 Pfam Major intrinsic protein 83 299 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 PANTHER AQUAPORIN-8 75 309 IPR034294 -
Bisa05g1269 319 FunFam Probable aquaporin TIP1-1 73 316 - -
Bisa05g1269 319 PRINTS Major intrinsic protein family signature 90 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 PRINTS Major intrinsic protein family signature 167 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 PRINTS Major intrinsic protein family signature 212 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 PRINTS Major intrinsic protein family signature 245 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 PRINTS Major intrinsic protein family signature 282 302 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 PRINTS Major intrinsic protein family signature 130 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa05g1269 319 ProSitePatterns MIP family signature. 148 156 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1269 Bisa-ChrBisa05 22249471 22252247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1269 72 317 Major Intrinsic Protein MIP AT2G25810 79.268 2.25e-132 375