Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1267 ATGGCGGAAACCTCTCAGGACCTGCAATCCCAATCTATCCATGTGAACACAGAGATGGTGATTGTGGTGCTCTCCATAATGTTTACGATAACGTTGGTCCTGATTGCTTATGTAAAGTGCTGTCGAGACAACTCTTCTGACGGAGATAATGTTCCTGGACTTGCTGGATTAGGCCCTACATTTTCTGGGGTTGACAGGCAAGTAATCGAGGCACTTCCCGCCTTCAAGTTTTCGTGGCTCAGGGGATCAAAGGAAGGCCTCGAATGTGTTGTTTGCTTATCTAAATTCGAAGACAGTGAAACCCTTAGATTGCTTCCAAAGTGCAAGCATGCTTTCCATGTAAATTGCATAGACAAGTGGCTCGAGAGTCACTCGAGCTGCCCTCTTTGCAGGTCCAGTGTAGACCCAGGGGACGTCAGAAGCTTCAATTTTTCAATCAGCTCGAGCTTCCTGCGAGTCCCTTCCAATTTAACAGAGGACCCAAATGTTGAAATCTTCGTGCAGAGGGAGCAATCACGTCACGGGTCATTTAACGCTGGAAGCAAGAAGGATGAACTACCCATTGATAATGGTGGGAATCGGGAAATTCTGCACAAGTTCAATCACAGAATAATTGTATCTGGTTTTGTGACCAGAAGCAGGTGGAGTGATCTTAATTCCGCAGATTTACTATCATTAAACTCTGAGATGCTCAGTGTTATGTCAAGCAGAAGGTTCTCTCCTCTGGAATCCACCAAGGGTAGTTCTAACCTTCCTTCGACTTCCAAAGAGGAAGAAACTTCGTTGAAGCTATTGAATCCTGGTGAGAGGAGATCGGTATCTGAGATTGCTACTGTTCCAAGATTCGCAGGAATAAACAGAGTGAAGAAATTGGTAGCGTCTGATGAGAACGATGGAAGGGAAGAGAGAGTGTGGAGGATGTGGTTGGCGATTGCGCGGCGAACCGTGCAGGGGTTTGCCAGACGAGAGAGAGGCTCAAGAGAATCAGAACAAAAGCAATTAGCTTCAGATGTGTGA 1017 0.4621 MAETSQDLQSQSIHVNTEMVIVVLSIMFTITLVLIAYVKCCRDNSSDGDNVPGLAGLGPTFSGVDRQVIEALPAFKFSWLRGSKEGLECVVCLSKFEDSETLRLLPKCKHAFHVNCIDKWLESHSSCPLCRSSVDPGDVRSFNFSISSSFLRVPSNLTEDPNVEIFVQREQSRHGSFNAGSKKDELPIDNGGNREILHKFNHRIIVSGFVTRSRWSDLNSADLLSLNSEMLSVMSSRRFSPLESTKGSSNLPSTSKEEETSLKLLNPGERRSVSEIATVPRFAGINRVKKLVASDENDGREERVWRMWLAIARRTVQGFARRERGSRESEQKQLASDV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1267 338 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Bisa05g1267 338 FunFam RING-H2 finger protein ATL43 64 138 - -
Bisa05g1267 338 CDD RING-H2_EL5-like 88 131 - -
Bisa05g1267 338 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 6 323 - -
Bisa05g1267 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 137 IPR013083 -
Bisa05g1267 338 MobiDBLite consensus disorder prediction 238 261 - -
Bisa05g1267 338 MobiDBLite consensus disorder prediction 238 262 - -
Bisa05g1267 338 SMART ring_2 89 130 IPR001841 -
Bisa05g1267 338 SUPERFAMILY RING/U-box 69 136 - -
Bisa05g1267 338 Pfam Ring finger domain 88 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1267 Bisa-ChrBisa05 22233435 22234451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1267 19 333 C3H Transcription Factor Family AT2G20030 41.159 6.33e-75 234