Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1264 ATGAGTGTTGAACCCCAGAATTCTGAAACAGAGAGCAGCTCGAACTCATCCTCATCTCCACCAACTTCACCGTCCTCGTCTCCTTTATGCAGAACCAGAGCACTGAAGAACTCTGTCTCTGTTTCCCCACAGACTAAACCAGAGGACCCAGAAGCTAAAAAGATAAAACGCAGTCGAGACTCCAATAAACATCCTGTGTATCGTGGGGTACGTATGCGCAATTGGGGCAAATGGGTGTCTGAAATTCGAGAGCCACGCAAGAAATCTCGCATATGGTTGGGTACATTCCCCACCCCTGAAATGGCCGCCAGAGCACACGACGTCGCCGCTCTGAGCATCAAAGGCAGCTCCGCCATTCTCAATTTCCCTCAACTAGCCAACTCTCTCCCTCGTCCTGCCTCTCTCTCTCCTCGCGACGTCCAGGCTGCTGCGGCGAAAGCCGCACAGATGGACCACTTCGACTTGCCGTCGTCCTCGTCGGCTTCGACATTGTCGTCGTCGTCTTCGATGTCGTCATTGGTTTCGGCGGTGGAAATGTCAACTGGATCGGACGAATTGAGCGAGATTATAGAGTTGCCGAGGTTGGAGACGAGTGAGGAAGCGAGTGAGTTGAGGAAGGAGTTTGTGTTCGTGGACTCGGTGTGTGATGGATGGATGTATCAGCCGCCATGGTCACAGAGTATGGAGGACTGTAATAGGTATGTTGCTGATCAGCTGGCTGTGACAGAGAGTGGGATTATGAATAGTCTTGATAGTATGCTCTGGAATTACTGA 774 0.5155 MSVEPQNSETESSSNSSSSPPTSPSSSPLCRTRALKNSVSVSPQTKPEDPEAKKIKRSRDSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPQLANSLPRPASLSPRDVQAAAAKAAQMDHFDLPSSSSASTLSSSSSMSSLVSAVEMSTGSDELSEIIELPRLETSEEASELRKEFVFVDSVCDGWMYQPPWSQSMEDCNRYVADQLAVTESGIMNSLDSMLWNY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1264 257 CDD AP2 67 123 IPR001471 GO:0003700|GO:0006355
Bisa05g1264 257 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Bisa05g1264 257 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Bisa05g1264 257 MobiDBLite consensus disorder prediction 1 65 - -
Bisa05g1264 257 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Bisa05g1264 257 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Bisa05g1264 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 202 - -
Bisa05g1264 257 MobiDBLite consensus disorder prediction 47 65 - -
Bisa05g1264 257 MobiDBLite consensus disorder prediction 1 45 - -
Bisa05g1264 257 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Bisa05g1264 257 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Bisa05g1264 257 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Bisa05g1264 257 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1264 Bisa-ChrBisa05 22186478 22187251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1264 40 230 AP2-EREBP Transcription Factor Family AT5G11590 65.306 5.32e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g1264 AP2 3.1e-14 CL0081