Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1259 ATGGACCACCATCCCCTCTGCCGCCGCCACCTCTACCGCCGTCTTCTCCACCGCTCCGATTGCAACTTCTTCATGCTGGGCGCCACCGGGAATGTGTACAAAGTGACCTTAGCTTCCACACCCTCATGCACCTGCCCTGACCCCACAACCCCCTGCAACCACATTCTGTTCGTGTTGATTCAAGTTCTGGGCGTGTCTCTTGACGACGTGTGCCTGCGGCGGAGGACCCTCAGGCCGTGCGAGCTCCACCGCCTTCTCGTCACCCCCACCCTGCTGGAAGCACTGGCAGGGCCCACCCTCCGCCAGAGGTTCCACCAGCAGTTCTCAAAGGAAGGCGCTCTGGTTCCGATCATACAGATAGAAGAAGGGTCAAGATGCCCAATTTGTCTGGAGGAGATGGGGAAGGAAGAGAGAGTGGTGGCGTGTGGGACATGCGAGAATCCTGTTCATGAAGAGTGCATGGTGAAGTGGAAGAGAAGCAGGGGAAAGAGATGGGCGAGATGTGTGATTTGCAGAGCCAAGTGGAGGGACAAGACAGAGCAGGATAAGTATCTGAATCTATCTGCTTATATTATTGAGGACGACATCACCCAGCCAAAAGGGGTCTCTCTACTGCCTAATTAA 624 0.5561 MDHHPLCRRHLYRRLLHRSDCNFFMLGATGNVYKVTLASTPSCTCPDPTTPCNHILFVLIQVLGVSLDDVCLRRRTLRPCELHRLLVTPTLLEALAGPTLRQRFHQQFSKEGALVPIIQIEEGSRCPICLEEMGKEERVVACGTCENPVHEECMVKWKRSRGKRWARCVICRAKWRDKTEQDKYLNLSAYIIEDDITQPKGVSLLPN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1259 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 189 IPR013083 -
Bisa05g1259 207 ProSiteProfiles Zinc finger SWIM-type profile. 33 63 IPR007527 GO:0008270
Bisa05g1259 207 Pfam Ring finger domain 125 172 IPR001841 -
Bisa05g1259 207 ProSiteProfiles Zinc finger RING-type profile. 126 172 IPR001841 -
Bisa05g1259 207 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 14 181 IPR039903 GO:0061630
Bisa05g1259 207 SUPERFAMILY RING/U-box 119 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1259 Bisa-ChrBisa05 22086119 22086742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1259 121 197 C3H Transcription Factor Family AT3G58720 31.169 7.70e-06 43.5