Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1258 ATGGAAGCACCCGAGTATTTCCTGAACGCCTTTTACCCTCAATTCACCTCCGACGTCTCCAAGACCCCCTCTGGCCCCGCAGTCGCCGAGCATTTCATCGTTGAGGATCTCCTTGACTTCTCTCACGTCGACACCACCGTTACCGACCCCACCTTCGACTCTGTCCCTGGCAACTCCGCCGATTCTTCCACCGTAAACGCCGTCGATAGCTCCAATTCCTCCTCCTTCTCTGGCTGCGTCGACCCCAATTTCACTGCCGATATTGGCTCCAGAAATTTCCCCGACGCCCATTTCTCCAGCGACCTCTGTGTCCCGTGTGATGATATAGCGGAGCTGGAATGGCTGTCGAATATCGTGGAGGAATCATTCTCGAGCGAGGACCTGCAGAAGCTGCAACTGATATCGGGGGTCAAAGCCCGAAACGACGACGCATCAGAAACCCGCGAATTCCAGGACCACGAACCCAACCGAACCAACGTCCTTTTCAACCCCGAAGTCTCCGTTCCAGCAAAGGCTCGCAGCAAGCGCTCCCGCGCGCCGCCATGCAATTGGACCTCTCGCCTCCTCGTCCTCTCTCCGACATCCTCTTCTTCCGAACCCGACGTCGCCCTTCCCGCCCCGACTCCCAACACTGGAAAGAAACCGGGAAAGTCGGAGCCCAGGAAGAAAGAAAACGGGAACGGCGCCGGCGAAGCGTCCGGCGAGGTGCGGAAGTGCCTGCATTGCGCGACGGACAAGACGCCGCAGTGGCGGACGGGACCCATGGGCCCGAAGACGCTGTGCAACGCTTGCGGAGTGAGGTACAAGTCGGGTCGGCTAGTGCCGGAGTATCGGCCGGCGGCGAGCCCGACGTTCATGCTGACGAAGCACTCGAACTCGCACCGGAAGGTGCTGGAGCTGCGGCGGCAGAAGGAGATGATGCTGAGGCAGCATCATCAGCAAGCAGAGCAGTTCCTGCAACATCAAAACATGATGTTTGATGTGACCAACGGTGAGGATTACTTGATCCACCAACACGTGGGACCCGATTTCAGGCAGCTCATATAG 1047 0.5855 MEAPEYFLNAFYPQFTSDVSKTPSGPAVAEHFIVEDLLDFSHVDTTVTDPTFDSVPGNSADSSTVNAVDSSNSSSFSGCVDPNFTADIGSRNFPDAHFSSDLCVPCDDIAELEWLSNIVEESFSSEDLQKLQLISGVKARNDDASETREFQDHEPNRTNVLFNPEVSVPAKARSKRSRAPPCNWTSRLLVLSPTSSSSEPDVALPAPTPNTGKKPGKSEPRKKENGNGAGEASGEVRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHSNSHRKVLELRRQKEMMLRQHHQQAEQFLQHQNMMFDVTNGEDYLIHQHVGPDFRQLI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1258 348 ProSiteProfiles GATA-type zinc finger domain profile. 233 269 IPR000679 GO:0006355|GO:0043565
Bisa05g1258 348 MobiDBLite consensus disorder prediction 193 233 - -
Bisa05g1258 348 SMART GATA_3 233 283 IPR000679 GO:0006355|GO:0043565
Bisa05g1258 348 MobiDBLite consensus disorder prediction 141 155 - -
Bisa05g1258 348 MobiDBLite consensus disorder prediction 140 180 - -
Bisa05g1258 348 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 237 297 - -
Bisa05g1258 348 FunFam GATA transcription factor 230 316 - -
Bisa05g1258 348 ProSitePatterns GATA-type zinc finger domain. 239 264 IPR000679 GO:0006355|GO:0043565
Bisa05g1258 348 Gene3D - 233 283 IPR013088 GO:0006355|GO:0008270
Bisa05g1258 348 PIRSF Txn_fac_GATA_plant 17 330 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bisa05g1258 348 CDD ZnF_GATA 238 285 IPR000679 GO:0006355|GO:0043565
Bisa05g1258 348 Pfam GATA zinc finger 239 272 IPR000679 GO:0006355|GO:0043565
Bisa05g1258 348 PANTHER GATA TRANSCRIPTION FACTOR 31 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1258 Bisa-ChrBisa05 22078269 22079707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1258 32 348 C2C2-Gata Transcription Factor Family AT5G25830 50.898 2.43e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa05g1258 GATA 3.2e-15 CL0167