Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1242 ATGTCGTGGCAACAGTACGTGGATGAGCACTTAATGTGCGATGTTGATGGCAACCATCTCACTGCTGCTGCAATCATCGGTCAAGACGGTACTGTTTGGGCTCAGAGCTCTTCCTTCCCTCAGGGCTCTGGTGGCATGTCTGTTAAGAAGACGAACATGGCATTAATTATTGGAATTTATGATGAGCCTTTGACTCCTGGTCAATGCAATATGATTGTTGAAAGTGAGAATAGTGGTGTAGCTGGCTTGGAGTTGTATTCTCAAACCTTCGGATTGTATCAAGTTTGTGAATAA 294 0.4422 MSWQQYVDEHLMCDVDGNHLTAAAIIGQDGTVWAQSSSFPQGSGGMSVKKTNMALIIGIYDEPLTPGQCNMIVESENSGVAGLELYSQTFGLYQVCE 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1242 97 Gene3D Dynein light chain 2a, cytoplasmic 1 40 - -
Bisa05g1242 97 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bisa05g1242 97 Pfam Profilin 41 75 IPR005455 GO:0003779
Bisa05g1242 97 Pfam Profilin 1 40 IPR005455 GO:0003779
Bisa05g1242 97 SMART prof_2 1 80 IPR005455 GO:0003779
Bisa05g1242 97 SUPERFAMILY Profilin (actin-binding protein) 2 74 IPR036140 -
Bisa05g1242 97 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bisa05g1242 97 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Bisa05g1242 97 PANTHER PROFILIN 1 39 IPR005455 GO:0003779
Bisa05g1242 97 Gene3D Dynein light chain 2a, cytoplasmic 41 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1242 Bisa-ChrBisa05 21792202 21793172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1242 1 75 Cytoskeleton Gene Families AT2G19760 45.455 9.70e-33 108