Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1222 ATGATTCGTCAATCCATCTTCTTTCTTATTGGACTCATCGTTTCCATGTCTGTTATTCCTCAAGCCATCAGTGACAGCCCAACTCAATTTTTTTCTCTGATGAAAGAGTCTCTTGCGGGGAACTATCCCCTAAATTGGGATGTCACAGGAGGGAAACCTGTCTGCAACTTCAGCGGAGTTAGCTGTAACAACCAAGGGGACGTGATCAATCTTGACATCTCCGGTTGGTCACTTTCTGGGAACTTCCCGTCAGATATATGCTCCTATCTACCAGAGTTACGTTTTCTACGTCTCGGCCACAATCGTTTGAGAGGAAATTTTCTTGACAGCATAATTAACTGTTCCCACTTGGAAGAACTTAACATGAATCGTGTGTACCATACAGGAAGCCTTCCAGATTTCTCACCTCTGAAATCTCTAAGGATCCTGGATTTGTCATACAACTTATTCACCGGCCAGTTTCCCATGTCAGTATTTAACCTCACCAATCTTGAGGTGCTTAACTTCAATGAGAACGGAGGTTTCAAATTGTGGGAGTTGCCAGAGGATATGTACAAGATGAAAAATCTCAAGTCTGCGATCTTGTCGACATGCATGGTGCGTGGTCGAATCCCTCCATCCATAGGGAATCTTACATCTCTGGTTGATCTTGAACTGAGTGGAAATTTCCTCACGGGTCAAATTCCTGAAGAGCTTGGATTGCTGAAAAACTTGCAGCAGCTTGAGCTTTACTATAACCAACTTGTTGGCAGTATACCCAAGGAGTTAGGAAATCTCACAGAGCTCATAGACTTGGACATGTCAGTCAATAAGTTGGCGGGAAGCCTCCCGGAATCTGTATGTGGTCTTCCCAAGCTCGAAGTCTTGCAGCTATACAACAATAGCCTCACAGGAGAAATCCCAGGTGTGATAGAAAATTCAAAAAGCTTAAGAATATTATCTCTTTATGACAATTTCCTCACCGGAGAAGTCCCCAGAAGTCTGGGTCAATTCTCTGGAATGCTAGTTCTCGACCTATCCGAAAACAGACTATCTGGTCCATTGCCAACAGAGGTTTGCAGGGGAGGCAAACTGCTCTACTTTCTTGTTTTGGATAATATGTTTTCTGGAGAGCTGCCCGACAGTTATGCTACATGCTGGACACTGTTGAGGTTTCGAGTCAGCAACAACTATTTGGTGGGCACAATTCCCCAGGGACTTCTTGGTCTTCCACACGTTTCAATAATTGATCTGAGTAACAATAATTTGACTGGTCCAATTTTTGAGACCACGGGAAATCCAAGAAATTTGTCAGAACTGTTCATACAGAGGAACAGAATTTCAGGGGTTATACCTCCTACAATCTCTCGAGCTACTAATCTGGTGAAGATTGATTTCAGCAATAACCTTCTTTCTGGTCCAATACCTTCGGAAATTGGCAACCTGAAGAAGCTTAATTTACTGATGCTGCAAGGGAATAAGCTGAATTATTCCATCCCCAGCTCACTTTCCTTATTAAAATCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACAGGTAGCATCCCTGAAAGTTTGTCTGATCTGCTGCCTAACTCTATCAACTTTTCAAATAACTTGCTTTCCGGTCCAATTCCTCCCTCGTTGATAAAAGGAGGTTTAGTTGAAAGCTTCTCAGGGAACCCGGGTCTCTGTGTGTCACTGGTCTATGCTAATTCATCGGATCAAAATTTTCCCATATGTTCGAAGACTGGCAACAAAAAGAGGCTGAACACCTTCTGGGTAGCTGGGATTTCAGCGGTTTTGATCATAACTGGAGCTGCCTTGTTTCTAAAACGTAGGTGTAGCAAAGAGAGAGCTGCGGTGGAACATGATGAAACACTGTCCTCGTCATTATTCTCTTACGAAGTAAAGAGCTTTCACAGAATAACTATCGACCAACGGGAGATCACTGAGGCCATGGTCGAAAAGAATATAGTGGGTCGAGGAGGCTCCGGGACAGTGTACAAGATCGAGTTGAAAAGCGGTGAAATTGTTGCAGTGAAGAAGCTATGGAGTCGAAAGTCAAAGGATTCAGCTCCAGTTTTGGACAAGACATTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGACACAAGAACATTGTCAAATTGTACTGCTACTTTTCAAGCTTGGACTGCAGCTTGTTAGTATATGAGTACATGACAAATGGTAATTTATGGGATGCTCTGCACAATGGTTGGGTCCATTTGGACTGGCCTACTCGCCATAAAATTGCACTGGGGATTGCACAGGGTCTGGCCTACCTCCACCACGATTTGCTTCTTCCCATTATTCATAGAGACATTAAGCCAACTAATATCCTGCTGGATGAAAACTACCAACCCAAGGTTGCAGATTTCGGGATCGCCAAGGTTTTGCAGGCAATAAGAGGAGGGAAGGATTCCACATCAATTGTTATTGCAGGCACATGTGGTTACTTAGCACCAGAGTATGCTTATTCATCTAGAGCAACAACCAAGTGTGATGTCTACAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCTTGTGGAGGAAGAATTTGGAGATAACAGAAACATCGTGTATTGGGTTTCAAACAAAGTGGAGAGGAAGGAAGGGGTTAGTGAGGTATTAGACAAGCGATTAGTAGAGTCATACAAGGAGGAAATGATTCAGGTGCTCCGAATTGCCATCCGTTGCACCTTCAAGGCTCCAGCTCTTCGACCGACCATGAAAGAGGTAGTTCAGTTACTGATGAAAGCAAACCCGTCACCGCCAAGCAAGCTGTCCAGTAAGACCAAAGAAACATCAAATGCCACCTTGACAAAGAACCCCTTCTAG 2856 0.437 MIRQSIFFLIGLIVSMSVIPQAISDSPTQFFSLMKESLAGNYPLNWDVTGGKPVCNFSGVSCNNQGDVINLDISGWSLSGNFPSDICSYLPELRFLRLGHNRLRGNFLDSIINCSHLEELNMNRVYHTGSLPDFSPLKSLRILDLSYNLFTGQFPMSVFNLTNLEVLNFNENGGFKLWELPEDMYKMKNLKSAILSTCMVRGRIPPSIGNLTSLVDLELSGNFLTGQIPEELGLLKNLQQLELYYNQLVGSIPKELGNLTELIDLDMSVNKLAGSLPESVCGLPKLEVLQLYNNSLTGEIPGVIENSKSLRILSLYDNFLTGEVPRSLGQFSGMLVLDLSENRLSGPLPTEVCRGGKLLYFLVLDNMFSGELPDSYATCWTLLRFRVSNNYLVGTIPQGLLGLPHVSIIDLSNNNLTGPIFETTGNPRNLSELFIQRNRISGVIPPTISRATNLVKIDFSNNLLSGPIPSEIGNLKKLNLLMLQGNKLNYSIPSSLSLLKSLNVLDLSNNLLTGSIPESLSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSLVYANSSDQNFPICSKTGNKKRLNTFWVAGISAVLIITGAALFLKRRCSKERAAVEHDETLSSSLFSYEVKSFHRITIDQREITEAMVEKNIVGRGGSGTVYKIELKSGEIVAVKKLWSRKSKDSAPVLDKTLKTEVETLGNIRHKNIVKLYCYFSSLDCSLLVYEYMTNGNLWDALHNGWVHLDWPTRHKIALGIAQGLAYLHHDLLLPIIHRDIKPTNILLDENYQPKVADFGIAKVLQAIRGGKDSTSIVIAGTCGYLAPEYAYSSRATTKCDVYSFGVILMELITGKKLVEEEFGDNRNIVYWVSNKVERKEGVSEVLDKRLVESYKEEMIQVLRIAIRCTFKAPALRPTMKEVVQLLMKANPSPPSKLSSKTKETSNATLTKNPF 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1222 951 MobiDBLite consensus disorder prediction 927 951 - -
Bisa05g1222 951 FunFam Leucine-rich repeat receptor-like protein kinase 177 279 - -
Bisa05g1222 951 Gene3D Ribonuclease Inhibitor 29 176 IPR032675 -
Bisa05g1222 951 FunFam receptor protein-tyrosine kinase CEPR1 631 728 - -
Bisa05g1222 951 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 39 212 - -
Bisa05g1222 951 MobiDBLite consensus disorder prediction 928 951 - -
Bisa05g1222 951 ProSiteProfiles Protein kinase domain profile. 648 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1222 951 Pfam Leucine rich repeat 428 488 IPR001611 GO:0005515
Bisa05g1222 951 ProSiteProfiles Leucine-rich repeat profile. 501 524 IPR001611 GO:0005515
Bisa05g1222 951 SMART LRR_typ_2 161 187 IPR003591 -
Bisa05g1222 951 SMART LRR_typ_2 211 234 IPR003591 -
Bisa05g1222 951 SMART LRR_typ_2 90 115 IPR003591 -
Bisa05g1222 951 SMART LRR_typ_2 499 523 IPR003591 -
Bisa05g1222 951 SMART LRR_typ_2 283 307 IPR003591 -
Bisa05g1222 951 SMART LRR_typ_2 475 498 IPR003591 -
Bisa05g1222 951 SMART LRR_typ_2 331 355 IPR003591 -
Bisa05g1222 951 SMART LRR_typ_2 235 259 IPR003591 -
Bisa05g1222 951 SUPERFAMILY L domain-like 283 541 - -
Bisa05g1222 951 Gene3D Ribonuclease Inhibitor 307 569 IPR032675 -
Bisa05g1222 951 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 729 942 - -
Bisa05g1222 951 SUPERFAMILY RNI-like 67 351 - -
Bisa05g1222 951 Gene3D Transferase(Phosphotransferase) domain 1 729 948 - -
Bisa05g1222 951 PRINTS Leucine-rich repeat signature 499 512 - -
Bisa05g1222 951 PRINTS Leucine-rich repeat signature 334 347 - -
Bisa05g1222 951 Gene3D Ribonuclease Inhibitor 177 306 IPR032675 -
Bisa05g1222 951 Pfam Protein kinase domain 650 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1222 951 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Bisa05g1222 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Bisa05g1222 951 ProSitePatterns Protein kinases ATP-binding region signature. 654 677 IPR017441 GO:0005524
Bisa05g1222 951 SMART serkin_6 648 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1222 951 SUPERFAMILY Protein kinase-like (PK-like) 634 924 IPR011009 -
Bisa05g1222 951 Gene3D Phosphorylase Kinase; domain 1 630 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1222 Bisa-ChrBisa05 21405502 21408713 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1222 24 937 Receptor kinase-like Gene Family AT5G49660 65.980 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa05g1222 Pkinase 9.9e-49 CL0016